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本文引用的文献

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Constitutive expression of the cryptic vanGCd operon promotes vancomycin resistance in Clostridioides difficile clinical isolates.隐秘 vanGCd 操纵子的组成型表达促进艰难梭菌临床分离株对万古霉素的耐药性。
J Antimicrob Chemother. 2020 Apr 1;75(4):859-867. doi: 10.1093/jac/dkz513.
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Open-access bacterial population genomics: BIGSdb software, the PubMLST.org website and their applications.开放获取的细菌群体基因组学：BIGSdb软件、PubMLST.org网站及其应用。
Wellcome Open Res. 2018 Sep 24;3:124. doi: 10.12688/wellcomeopenres.14826.1. eCollection 2018.
3
New York City House Mice (Mus musculus) as Potential Reservoirs for Pathogenic Bacteria and Antimicrobial Resistance Determinants.纽约市家鼠（Mus musculus）作为潜在的致病菌和抗生素耐药性决定因素的储存库。
mBio. 2018 Apr 17;9(2):e00624-18. doi: 10.1128/mBio.00624-18.
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Clinical Practice Guidelines for Clostridium difficile Infection in Adults and Children: 2017 Update by the Infectious Diseases Society of America (IDSA) and Society for Healthcare Epidemiology of America (SHEA).临床实践指南：成人和儿童艰难梭菌感染：美国传染病学会（IDSA）和美国医疗保健流行病学学会（SHEA）2017 年更新。
Clin Infect Dis. 2018 Mar 19;66(7):987-994. doi: 10.1093/cid/ciy149.
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Recent advances in the understanding of antibiotic resistance in Clostridium difficile infection.艰难梭菌感染中抗生素耐药性认识的最新进展
Ther Adv Infect Dis. 2016 Feb;3(1):23-42. doi: 10.1177/2049936115622891.
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A cfr-like gene from Clostridium difficile confers multiple antibiotic resistance by the same mechanism as the cfr gene.来自艰难梭菌的一个类cfr基因通过与cfr基因相同的机制赋予多重抗生素抗性。
Antimicrob Agents Chemother. 2015 Sep;59(9):5841-3. doi: 10.1128/AAC.01274-15. Epub 2015 Jul 6.
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Development and validation of an internationally-standardized, high-resolution capillary gel-based electrophoresis PCR-ribotyping protocol for Clostridium difficile.艰难梭菌国际标准化高分辨率毛细管凝胶电泳PCR核糖分型方案的开发与验证
PLoS One. 2015 Feb 13;10(2):e0118150. doi: 10.1371/journal.pone.0118150. eCollection 2015.
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Trimmomatic: a flexible trimmer for Illumina sequence data.Trimmomatic：一款适用于 Illumina 测序数据的灵活修剪工具。
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
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SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
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Clostridium difficile infection caused by the epidemic BI/NAP1/027 strain.由流行的BI/NAP1/027菌株引起的艰难梭菌感染。
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通过美国疾病控制与预防中心（CDC）及美国食品药品监督管理局（FDA）抗生素耐药性菌株库获取的艰难梭菌分离株的特性分析。

Characterization of Clostridioides difficile Isolates Available through the CDC & FDA Antibiotic Resistance Isolate Bank.

作者信息

Paulick Ashley, Adamczyk Michelle, Anderson Karen, Vlachos Nick, Machado María-José, McAllister Gillian, Korhonen Lauren, Guh Alice Y, Halpin Alison Laufer, Rasheed J Kamile, Karlsson Maria, Lutgring Joseph D, Gargis Amy S

机构信息

Division of Healthcare Quality Promotion, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.

Goldbelt C6, LLC, Chesapeake, Virginia, USA.

出版信息

Microbiol Resour Announc. 2021 Jan 7;10(1):e01011-20. doi: 10.1128/MRA.01011-20.

DOI:10.1128/MRA.01011-20
PMID:33414286
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8407687/
Abstract

Thirty isolates collected in 2016 through the Centers for Disease Control and Prevention Emerging Infections Program were selected for reference antimicrobial susceptibility testing and whole-genome sequencing. Here, we present the genetic characteristics of these isolates and announce their availability in the CDC & FDA Antibiotic Resistance Isolate Bank.

摘要

通过疾病控制与预防中心新发传染病项目在2016年收集的30株分离株被选用于参考抗菌药物敏感性测试和全基因组测序。在此，我们展示这些分离株的遗传特征，并宣布它们可在疾病预防控制中心和食品药品监督管理局抗生素耐药性分离株库中获取。