• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种预测多途径药物相互作用的计算方法:以结肠癌药物伊立替康为例。

A computational approach to predict multi-pathway drug-drug interactions: A case study of irinotecan, a colon cancer medication.

作者信息

Assiri Abdullah, Noor Adeeb

机构信息

Department of Clinical Pharmacy, College of Pharmacy, King Khalid University, Abha 62529, Saudi Arabia.

Department of Information Technology, Faculty of Computing and Information Technology, King Abdulaziz University, Jeddah 80221, Saudi Arabia.

出版信息

Saudi Pharm J. 2020 Dec;28(12):1507-1513. doi: 10.1016/j.jsps.2020.09.017. Epub 2020 Sep 29.

DOI:10.1016/j.jsps.2020.09.017
PMID:33424244
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7783232/
Abstract

Drug-drug interactions (DDIs) are a potentially distressing corollary of drug interventions, and may result in discomfort, debilitating illness, or even death. Existing research predominantly considers only a single level of interaction; however, serious health complications may result from multi-pathway DDIs, and so new methods are needed to enable predicting and preventing complex DDIs. This article introduces a novel method for the prediction of DDIs at two pharmacological levels (metabolic and transporter interactions) by means of a rule-based model implemented with Semantic Web technologies. The chemotherapy agent irinotecan is used as a case study for demonstrating the validity of this approach. Mechanistic and interaction data were mined from available sources and then used to predict interactors of irinotecan, including potential DDIs mediated by previously unidentified mechanisms. The findings also draw attention to the profound variation between DDI resources, indicating that clinical practice would see significant value from the development of an evidence-based resource to support DDI identification.

摘要

药物相互作用(DDIs)是药物干预可能令人困扰的一个结果,可能导致不适、使人衰弱的疾病甚至死亡。现有研究主要只考虑单一层次的相互作用;然而,多途径药物相互作用可能会导致严重的健康并发症,因此需要新的方法来预测和预防复杂的药物相互作用。本文介绍了一种通过使用语义网技术实现的基于规则的模型,在两个药理学水平(代谢和转运体相互作用)上预测药物相互作用的新方法。化疗药物伊立替康用作案例研究,以证明该方法的有效性。从现有来源挖掘机制和相互作用数据,然后用于预测伊立替康的相互作用物,包括由先前未确定的机制介导的潜在药物相互作用。这些发现还提请注意药物相互作用资源之间的巨大差异,表明基于证据的资源开发对于支持药物相互作用识别在临床实践中将具有重大价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2458/7783232/30b75e659620/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2458/7783232/20f8afe77d68/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2458/7783232/e1dfc617e9fa/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2458/7783232/7c0f04d5e8a3/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2458/7783232/30b75e659620/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2458/7783232/20f8afe77d68/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2458/7783232/e1dfc617e9fa/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2458/7783232/7c0f04d5e8a3/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2458/7783232/30b75e659620/gr4.jpg

相似文献

1
A computational approach to predict multi-pathway drug-drug interactions: A case study of irinotecan, a colon cancer medication.一种预测多途径药物相互作用的计算方法:以结肠癌药物伊立替康为例。
Saudi Pharm J. 2020 Dec;28(12):1507-1513. doi: 10.1016/j.jsps.2020.09.017. Epub 2020 Sep 29.
2
A Rule-Based Inference Framework to Explore and Explain the Biological Related Mechanisms of Potential Drug-Drug Interactions.基于规则的推理框架,探索和解释潜在药物-药物相互作用的生物学相关机制。
Comput Math Methods Med. 2022 Aug 17;2022:9093262. doi: 10.1155/2022/9093262. eCollection 2022.
3
Predict multi-type drug-drug interactions in cold start scenario.预测冷启动场景下的多类型药物-药物相互作用。
BMC Bioinformatics. 2022 Feb 16;23(1):75. doi: 10.1186/s12859-022-04610-4.
4
Drug-drug interaction discovery and demystification using Semantic Web technologies.利用语义网技术进行药物相互作用的发现与揭秘。
J Am Med Inform Assoc. 2017 May 1;24(3):556-564. doi: 10.1093/jamia/ocw128.
5
Predicting and understanding comprehensive drug-drug interactions via semi-nonnegative matrix factorization.通过半非负矩阵分解预测和理解药物-药物综合相互作用。
BMC Syst Biol. 2018 Apr 11;12(Suppl 1):14. doi: 10.1186/s12918-018-0532-7.
6
TMFUF: a triple matrix factorization-based unified framework for predicting comprehensive drug-drug interactions of new drugs.TMFUF:一种基于三重矩阵分解的新药综合药物相互作用预测统一框架。
BMC Bioinformatics. 2018 Nov 20;19(Suppl 14):411. doi: 10.1186/s12859-018-2379-8.
7
Data-driven prediction of adverse drug reactions induced by drug-drug interactions.药物相互作用引起的药物不良反应的数据驱动预测。
BMC Pharmacol Toxicol. 2017 Jun 8;18(1):44. doi: 10.1186/s40360-017-0153-6.
8
DINTO: Using OWL Ontologies and SWRL Rules to Infer Drug-Drug Interactions and Their Mechanisms.DINTO:使用OWL本体和SWRL规则推断药物相互作用及其机制。
J Chem Inf Model. 2015 Aug 24;55(8):1698-707. doi: 10.1021/acs.jcim.5b00119. Epub 2015 Aug 5.
9
DDI-PULearn: a positive-unlabeled learning method for large-scale prediction of drug-drug interactions.DDI-PULearn:一种用于大规模药物相互作用预测的正无标签学习方法。
BMC Bioinformatics. 2019 Dec 24;20(Suppl 19):661. doi: 10.1186/s12859-019-3214-6.
10
deepMDDI: A deep graph convolutional network framework for multi-label prediction of drug-drug interactions.深度 MDDI:一种用于药物-药物相互作用多标签预测的深度图卷积网络框架。
Anal Biochem. 2022 Jun 1;646:114631. doi: 10.1016/j.ab.2022.114631. Epub 2022 Feb 25.

引用本文的文献

1
Innovative horizons: harnessing drug repositioning for targeted therapeutics in colorectal cancer.创新视野:利用药物重新定位实现结直肠癌的靶向治疗
Naunyn Schmiedebergs Arch Pharmacol. 2025 Jul 1. doi: 10.1007/s00210-025-04289-3.
2
Temporal offset association between the number of irinotecan-related adverse reactions and pharmacogenomic studies: A cross-correlation analysis.伊立替康相关不良反应数量与药物基因组学研究之间的时间偏移关联:互相关分析
Saudi Pharm J. 2023 Jan;31(1):180-183. doi: 10.1016/j.jsps.2022.11.016. Epub 2022 Dec 1.
3
A Rule-Based Inference Framework to Explore and Explain the Biological Related Mechanisms of Potential Drug-Drug Interactions.

本文引用的文献

1
Risk of Drug-Drug Interactions in Out-Hospital Drug Dispensings in France: Results From the DRUG-Drug Interaction Prevalence Study.法国院外药品配药中药物相互作用的风险:药物 - 药物相互作用患病率研究结果
Front Pharmacol. 2019 Mar 22;10:265. doi: 10.3389/fphar.2019.00265. eCollection 2019.
2
Mechanism-based Pharmacovigilance over the Life Sciences Linked Open Data Cloud.基于机制的药物警戒在生命科学关联开放数据云上的应用
AMIA Annu Symp Proc. 2018 Apr 16;2017:1014-1023. eCollection 2017.
3
High Prevalence of Drug-Drug Interactions in Primary Health Care is Caused by Prescriptions from other Healthcare Units.
基于规则的推理框架,探索和解释潜在药物-药物相互作用的生物学相关机制。
Comput Math Methods Med. 2022 Aug 17;2022:9093262. doi: 10.1155/2022/9093262. eCollection 2022.
4
Anti-DDI Resource: A Dataset for Potential Negative Reported Interaction Combinations to Improve Medical Research and Decision-Making.抗药物-药物相互作用资源:一个用于潜在负面报告的相互作用组合的数据集,以改善医学研究和决策。
J Healthc Eng. 2022 Apr 9;2022:8904342. doi: 10.1155/2022/8904342. eCollection 2022.
5
A Data-Driven Medical Decision Framework for Associating Adverse Drug Events with Drug-Drug Interaction Mechanisms.基于数据的药物不良事件与药物相互作用机制关联的医学决策框架。
J Healthc Eng. 2022 Mar 3;2022:9132477. doi: 10.1155/2022/9132477. eCollection 2022.
6
Improving bioinformatics software quality through incorporation of software engineering practices.通过融入软件工程实践提高生物信息学软件质量。
PeerJ Comput Sci. 2022 Jan 5;8:e839. doi: 10.7717/peerj-cs.839. eCollection 2022.
7
A novel computational drug repurposing approach for Systemic Lupus Erythematosus (SLE) treatment using Semantic Web technologies.一种使用语义网技术治疗系统性红斑狼疮(SLE)的新型计算药物重新利用方法。
Saudi J Biol Sci. 2021 Jul;28(7):3886-3892. doi: 10.1016/j.sjbs.2021.03.068. Epub 2021 Apr 2.
在初级卫生保健中,药物-药物相互作用的高发生率是由其他医疗机构的处方引起的。
Basic Clin Pharmacol Toxicol. 2018 May;122(5):512-516. doi: 10.1111/bcpt.12939. Epub 2017 Dec 13.
4
Computational prediction of drug-drug interactions based on drugs functional similarities.基于药物功能相似性的药物相互作用的计算预测
J Biomed Inform. 2017 Jun;70:54-64. doi: 10.1016/j.jbi.2017.04.021. Epub 2017 Apr 30.
5
Drug-drug interaction discovery and demystification using Semantic Web technologies.利用语义网技术进行药物相互作用的发现与揭秘。
J Am Med Inform Assoc. 2017 May 1;24(3):556-564. doi: 10.1093/jamia/ocw128.
6
DINTO: Using OWL Ontologies and SWRL Rules to Infer Drug-Drug Interactions and Their Mechanisms.DINTO:使用OWL本体和SWRL规则推断药物相互作用及其机制。
J Chem Inf Model. 2015 Aug 24;55(8):1698-707. doi: 10.1021/acs.jcim.5b00119. Epub 2015 Aug 5.
7
Toward a complete dataset of drug-drug interaction information from publicly available sources.构建一个包含来自公开可用来源的药物相互作用信息的完整数据集。
J Biomed Inform. 2015 Jun;55:206-17. doi: 10.1016/j.jbi.2015.04.006. Epub 2015 Apr 24.
8
Consensus recommendations for systematic evaluation of drug-drug interaction evidence for clinical decision support.用于临床决策支持的药物相互作用证据系统评价的共识性建议。
Drug Saf. 2015 Feb;38(2):197-206. doi: 10.1007/s40264-014-0262-8.
9
Drug-drug interaction software in clinical practice: a systematic review.临床实践中的药物相互作用软件:一项系统评价
Eur J Clin Pharmacol. 2015 Feb;71(2):131-42. doi: 10.1007/s00228-014-1786-7. Epub 2014 Dec 23.
10
A study of potential adverse drug-drug interactions among prescribed drugs in medicine outpatient department of a tertiary care teaching hospital.某三级甲等教学医院内科门诊处方药物中潜在不良药物相互作用的研究
J Basic Clin Pharm. 2014 Mar;5(2):44-8. doi: 10.4103/0976-0105.134983.