Department of Burn and Plastic Surgery, The First Affiliated Hospital of Soochow University, No. 188 Shizi Street, Suzhou, 215000, People's Republic of China.
Department of Surgery, Soochow University, Suzhou, 215000, People's Republic of China.
Sci Rep. 2021 Jan 13;11(1):1023. doi: 10.1038/s41598-020-80336-8.
Keratins (KRTs), the intermediate filament-forming proteins of epithelial cells, are extensively used as diagnostic biomarkers in cancers and associated with tumorigenesis and metastasis in multiple cancers. However, the diverse expression patterns and prognostic values of KRTs in melanoma have yet to be elucidated. In the current study, we examined the transcriptional and clinical data of KRTs in patients with melanoma from GEO, TCGA, ONCOMINE, GEPIA, cBioPortal, TIMER and TISIDB databases. We found that the mRNA levels of KRT1/2/5/6/8/10/14/15/16/17 were significantly differential expressed between primary melanoma and metastatic melanoma. The expression levels of KRT1/2/5/6/10/14/15/16/17 were correlated with advanced tumor stage. Survival analysis revealed that the high transcription levels of KRT1/5/6/14/15/16/17 were associated with low overall survival in melanoma patients. GSEA analysis indicated that the most involved hallmarks pathways were P53 pathway, KRAS signaling, estrogen response early and estrogen response late. Furthermore, we found some correlations among the expression of KRTs and the infiltration of immune cells. Our study may provide novel insights for the selection of prognostic biomarkers for melanoma.
角蛋白(KRTs)是上皮细胞中的中间丝形成蛋白,在癌症中被广泛用作诊断生物标志物,与多种癌症的肿瘤发生和转移有关。然而,角蛋白在黑色素瘤中的不同表达模式和预后价值尚未阐明。在本研究中,我们从 GEO、TCGA、ONCOMINE、GEPIA、cBioPortal、TIMER 和 TISIDB 数据库中检查了黑色素瘤患者的角蛋白转录组和临床数据。我们发现,原发性黑色素瘤和转移性黑色素瘤之间 KRT1/2/5/6/8/10/14/15/16/17 的 mRNA 水平存在显著差异表达。KRT1/2/5/6/10/14/15/16/17 的表达水平与晚期肿瘤分期相关。生存分析显示,KRT1/5/6/14/15/16/17 的高转录水平与黑色素瘤患者的总生存率降低相关。GSEA 分析表明,最相关的标志性途径是 P53 途径、KRAS 信号、雌激素反应早期和雌激素反应晚期。此外,我们发现角蛋白表达与免疫细胞浸润之间存在一些相关性。我们的研究可能为黑色素瘤的预后生物标志物选择提供新的见解。