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免疫相关基因对指数的构建及其在转移性黑色素瘤预后分析中的应用。

Development of an immune-related gene pairs index for the prognosis analysis of metastatic melanoma.

机构信息

Second Department of Orthopaedics, The First People's Hospital of Qinzhou, No.8, Mingyang Road, Qinzhou, 535000, The Guangxi Zhuang Autonomous Region, China.

Thyroid Gland Breast Surgery, The First People's Hospital of Qinzhou, Qinzhou, 535000, The Guangxi Zhuang Autonomous Region, China.

出版信息

Sci Rep. 2021 Jan 13;11(1):1253. doi: 10.1038/s41598-020-80858-1.

Abstract

Melanoma is a skin cancer with great metastatic potential, which is responsible for the major deaths in skin cancer. Although the prognosis of melanoma patients has been improved with the comprehensive treatment, for patients with metastasis, the complexity and heterogeneity of diffuse diseases make prognosis prediction and systematic treatment difficult and ineffective. Therefore, we established a novel personalized immune-related gene pairs index (IRGPI) to predict the prognosis of patients with metastatic melanoma, which was conducive to provide new insights into clinical decision-making and prognostic monitoring for metastatic melanoma. Through complex analysis and filtering, we identified 24 immune-related gene pairs to build the model and obtained the optimal cut-off value from receiver operating characteristic curves, which divided the patients into high and low immune-risk groups. Meantime, the Kaplan-Meier analysis, Cox regression analysis and subgroup analysis showed that IRGPI had excellent prognostic value. Furthermore, IRGPI was shown that was closely associated with immune system in the subsequent tumor microenvironment analysis and gene set enrichment analysis. In addition, we broken through the data processing limitations of traditional researches in different platforms through the application of gene pairs, which would provide great credibility for our model. We believe that our research would provide a new perspective for clinical decision-making and prognostic monitoring in metastatic melanoma.

摘要

黑色素瘤是一种具有巨大转移潜力的皮肤癌,是导致皮肤癌死亡的主要原因。尽管综合治疗已经改善了黑色素瘤患者的预后,但对于转移性患者,弥漫性疾病的复杂性和异质性使得预后预测和系统治疗变得困难且无效。因此,我们建立了一种新的个性化免疫相关基因对指数(IRGPI)来预测转移性黑色素瘤患者的预后,这有助于为转移性黑色素瘤的临床决策和预后监测提供新的见解。通过复杂的分析和筛选,我们确定了 24 个免疫相关基因对来构建模型,并从接收器工作特征曲线中获得最佳截断值,将患者分为高免疫风险和低免疫风险组。同时,Kaplan-Meier 分析、Cox 回归分析和亚组分析表明,IRGPI 具有优异的预后价值。此外,在随后的肿瘤微环境分析和基因集富集分析中,IRGPI 表明与免疫系统密切相关。此外,我们通过基因对的应用突破了不同平台传统研究的数据处理限制,这为我们的模型提供了很大的可信度。我们相信,我们的研究将为转移性黑色素瘤的临床决策和预后监测提供新的视角。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d825/7806975/eb73f04ccead/41598_2020_80858_Fig1_HTML.jpg

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