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功能磁共振成像采集中运动伪影自动管理的图形界面:INFOBAR。

Graphical interface for automated management of motion artifact within fMRI acquisitions: INFOBAR.

作者信息

Anand Manish, Diekfuss Jed A, Slutsky-Ganesh Alexis B, Bonnette Scott, Grooms Dustin R, Myer Gregory D

机构信息

The SPORT Center, Division of Sports Medicine, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.

Emory Sport Performance and Research Center, Flowery Branch, GA, USA.

出版信息

SoftwareX. 2020 Jul-Dec;12. doi: 10.1016/j.softx.2020.100598. Epub 2020 Oct 21.

DOI:10.1016/j.softx.2020.100598
PMID:33447655
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7806167/
Abstract

Independent Component Analysis-based Automatic Removal of Motion Artifacts (ICA-AROMA; Pruim et al., 2015) is a robust approach to remove brain activity related to head motion within functional magnetic resonance imaging (fMRI) datasets. However, ICA-AROMA requires command line implementation and customized code to batch process large datasets. We developed a cross-platform, open-source graphical user terface r atch processing fMRI datasets using ICA-OMA (INFOBAR). INFOBAR allows a user to search directories, identify appropriate datasets, and batch execute ICA-AROMA. INFOBAR also has additional data processing options and visualization features to support all researchers interested in mitigating head motion artifact in post-processing using ICA-AROMA.

摘要

基于独立成分分析的运动伪影自动去除方法(ICA - AROMA;普鲁伊姆等人,2015年)是一种在功能磁共振成像(fMRI)数据集中去除与头部运动相关的大脑活动的稳健方法。然而,ICA - AROMA需要通过命令行实现并使用定制代码来批量处理大型数据集。我们开发了一个跨平台的开源图形用户界面INFOBAR,用于使用ICA - OMA处理fMRI数据集。INFOBAR允许用户搜索目录、识别合适的数据集并批量执行ICA - AROMA。INFOBAR还具有额外的数据处理选项和可视化功能,以支持所有有兴趣在使用ICA - AROMA进行后处理时减轻头部运动伪影的研究人员。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09f3/7806167/f9871a928896/nihms-1658116-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09f3/7806167/f7c142e765c6/nihms-1658116-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09f3/7806167/eb46b256ffb5/nihms-1658116-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09f3/7806167/034fe50182a7/nihms-1658116-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09f3/7806167/f9871a928896/nihms-1658116-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09f3/7806167/f7c142e765c6/nihms-1658116-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09f3/7806167/eb46b256ffb5/nihms-1658116-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09f3/7806167/034fe50182a7/nihms-1658116-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09f3/7806167/f9871a928896/nihms-1658116-f0004.jpg

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运动相关性脑震荡史对女性青少年双侧下肢膝关节运动控制脑活动和连通性的影响。
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