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胡颓子完整叶绿体基因组的特征分析,胡颓子是一种具有浓郁花香的韧性灌木。

Characterization of the complete chloroplast genome of Hu, a resilient shrub with strong floral fragrance.

作者信息

Nie Ziyan, Huang Xingzhao, Hu Zhikang, Li Xinlei, Yin Hengfu, Li Jiyuan

机构信息

School of Forestry and Landscape Architecture, Anhui Agricultural University, Hefei, China.

Key Laboratory of Forest Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou, China.

出版信息

Mitochondrial DNA B Resour. 2020 Jul 26;5(3):2998-2999. doi: 10.1080/23802359.2020.1797580.

Abstract

Hu is an economically valuable species in the genus . It is widely used for breeding ornaments and oil varieties. In this study, the complete chloroplast (cp) genome sequence of is assembled and annotated. The whole cp genome of is 156,912 bp in size, composed of a small single copy (SSC) region of 18,296 bp and a large single copy (LSC) region of 86,560 bp, separated by a pair of inverted repeats (IRs, IRA: 86,561-112,588; IRB: 130,885-156,912). The overall GC content of cp genome is 37.3%, with the base content A (31.08%), T (31.63%), C (19.02%), and G (18.27%). The phylogenetic analysis of 15 species based on 77 protein-coding genes shows that is evolutionarily close to .

摘要

胡[此处原文可能有缺失物种名]是该属中具有经济价值的物种。它被广泛用于培育观赏品种和油料品种。在本研究中,组装并注释了[此处原文可能有缺失物种名]的完整叶绿体(cp)基因组序列。[此处原文可能有缺失物种名]的整个cp基因组大小为156,912 bp,由一个18,296 bp的小单拷贝(SSC)区域和一个86,560 bp的大单拷贝(LSC)区域组成,由一对反向重复序列(IRs,IRA:86,561 - 112,588;IRB:130,885 - 156,912)分隔。[此处原文可能有缺失物种名]cp基因组的总体GC含量为37.3%,碱基含量分别为A(31.08%)、T(31.63%)、C(19.02%)和G(18.27%)。基于77个蛋白质编码基因对15个[此处原文可能有缺失物种名]物种进行的系统发育分析表明,[此处原文可能有缺失物种名]在进化上与[此处原文可能有缺失物种名]接近。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7198/7783147/22638f4b0a89/TMDN_A_1797580_F0001_C.jpg

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