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亚洲鲶鱼(鲇形目,异囊鲶科)的完整线粒体基因组及其与其他相关鱼类物种的比较。

The complete mitochondrial genome of the Asian stinging catfish (Siluriformes, Heteropneustidae) and its comparison with other related fish species.

作者信息

Behera Bijay Kumar, Baisvar Vishwamitra Singh, Kumari Kavita, Rout Ajaya Kumar, Pakrashi Sudip, Paria Prasenjet, Das Abhishek, Rao A R, Rai Anil

机构信息

Fish Biotechnology Laboratory, ICAR-Central Inland Fisheries Research Institute, Barrackpore, Kolkata, West Bengal, India.

ICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.

出版信息

Mitochondrial DNA B Resour. 2016 Dec 23;1(1):804-805. doi: 10.1080/23802359.2016.1219628.

Abstract

The complete mitogenome of is described using Ion Torrent (PGM sequencer), which showed it was 16,489 bp in size comprising 13 mRNAs, 22 tRNAs, 2 rRNA genes, and 858 bp as D-Loop control region, along with gene order and organization, being similar to most of the other related Siluriformes fish mitogenome of NCBI databases. The 20 RNAs were packed into a typical cloverleaf structure. The mitogenome in the present study has 99% similarity to the complete mitogenome sequence of mitogenome reported earlier and also would be helpful in understanding the population genetics, phylogenetics, and evolution of catfishes.

摘要

使用Ion Torrent(PGM测序仪)描述了[物种名称未给出]的完整线粒体基因组,其大小为16,489 bp,包含13个mRNA、22个tRNA、2个rRNA基因以及858 bp的D环控制区,其基因顺序和组织与NCBI数据库中大多数其他相关鲶形目鱼类的线粒体基因组相似。这20个RNA被包装成典型的三叶草结构。本研究中的线粒体基因组与先前报道的[物种名称未给出]线粒体基因组的完整序列有99%的相似性,也将有助于理解鲶鱼的群体遗传学、系统发育学和进化。

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