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(无尾目:蛙科)线粒体全基因组的测序与分析

Sequencing and analysis of the complete mitochondrial genome of (Anura: Ranidae).

作者信息

Liu Peng, Wang Heng, Zhao Wenge

机构信息

College of Life Science and Technology, Harbin Normal University, Harbin, Heilongjiang, P.R. China.

出版信息

Mitochondrial DNA B Resour. 2017 Jul 25;2(2):424-425. doi: 10.1080/23802359.2017.1357444.

DOI:10.1080/23802359.2017.1357444
PMID:33473848
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800792/
Abstract

In this study, the complete mitogenome sequence of (Anura: Ranidae) is determined using long PCR. It is a circular molecule of 20,571 bp in length (GenBank accession no. MF370348). The complete mtDNA sequence of contained 2 rRNA genes (12S rRNA and 16S rRNA), 22 tRNA genes, 13 protein-coding genes (PCGs) and 2 control regions (D-loops). The nucleotide composition was 28.6% A, 26.8% C, 14.0% G and 30.6% T. Mitochondrial genome analyses based on NJ method yield phylogenetic trees, including that 20 reported family Ranidae frogs. These molecular data presented here provide a useful tool for systematic analyses of genus .

摘要

在本研究中,使用长PCR技术测定了(无尾目:蛙科)的完整线粒体基因组序列。它是一个长度为20571 bp的环状分子(GenBank登录号:MF370348)。该物种的完整线粒体DNA序列包含2个rRNA基因(12S rRNA和16S rRNA)、22个tRNA基因、13个蛋白质编码基因(PCGs)和2个控制区(D环)。核苷酸组成是A占28.6%、C占26.8%、G占14.0%、T占30.6%。基于NJ法的线粒体基因组分析产生了系统发育树,其中包括20种已报道的蛙科蛙类。这里呈现的这些分子数据为该属的系统分析提供了一个有用的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e505/7800792/49a734b2cddd/TMDN_A_1357444_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e505/7800792/49a734b2cddd/TMDN_A_1357444_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e505/7800792/49a734b2cddd/TMDN_A_1357444_F0001_B.jpg

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本文引用的文献

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Zoolog Sci. 2007 Jan;24(1):71-80. doi: 10.2108/zsj.24.71.
2
Distinct specific status of the Korean brown frog, Rana amurensis coreana (Amphibia: Ranidae).韩国林蛙(Rana amurensis coreana)(两栖纲:蛙科)的独特特定地位。
Zoolog Sci. 2006 Feb;23(2):219-24. doi: 10.2108/zsj.23.219.
3
Reproductive isolating mechanisms and molecular phylogenetic relationships among Palearctic and Oriental brown frogs.
Mitochondrial DNA B Resour. 2023 Jul 6;8(7):742-745. doi: 10.1080/23802359.2023.2231587. eCollection 2023.
4
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Mitochondrial DNA B Resour. 2021 Nov 29;6(12):3493-3495. doi: 10.1080/23802359.2021.2002213. eCollection 2021.
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