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(鲱科鲱亚科,鲱形目)的完整线粒体基因组及鲱形目的系统发育研究

The complete mitochondrial genome of (Clupeinae, Clupeidae, Clupeoidei) and phylogenetic studies of Clupeoidei.

作者信息

Jiang Hui, Gong Li, Liu Liqin, Liu Bingjian, Lü Zhenming

机构信息

National Engineering Research Center of Marine Facilities Aquaculture, College of Marine Science and Technology, Zhejiang Ocean University, Zhoushan, People's Republic of China.

出版信息

Mitochondrial DNA B Resour. 2017 Dec 26;3(1):50-52. doi: 10.1080/23802359.2017.1419085.

Abstract

The complete mitochondrial genome of was sequenced using PCR amplification and primer walking sequence method. The complete mitochondrial genome of was 16,616 bp and contained 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes, and one control region (D-loop). The overall base composition was A 25.04%, C 29.36%, G 20.40%, T 25.20%. In this study, the gene arrangement was consistent with other mitochondrial genomes. Additionally, the phylogenetic relationships of 23 Clupeoidei species based on the complete genome was analyzed, and the result showed that firstly clustered with other two species, and These results would be useful for the investigation of phylogenetic relationship, taxonomic classification and phylogeography of the Clupeoidei.

摘要

使用聚合酶链反应(PCR)扩增和引物步移测序法对[物种名称]的完整线粒体基因组进行了测序。[物种名称]的完整线粒体基因组为16,616 bp,包含13个蛋白质编码基因、22个转运RNA基因、两个核糖体RNA基因和一个控制区(D环)。总体碱基组成为A 25.04%、C 29.36%、G 20.40%、T 25.20%。在本研究中,基因排列与其他[物种名称]线粒体基因组一致。此外,基于完整基因组分析了23种鲱形目鱼类的系统发育关系,结果表明[物种名称]首先与其他两种[物种名称]聚类,[其他两种物种名称]。这些结果将有助于鲱形目鱼类系统发育关系、分类学分类和系统地理学的研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9f3/7800547/d76c9174afcb/TMDN_A_1419085_F0001_B.jpg

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