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芍药属(芍药科:虎耳草目)的完整质体基因组序列。

Complete plastome sequence of Pall. (Paeoniaceae: Saxifragales).

作者信息

Samigullin Tahir H, Logacheva Maria D, Degtjareva Galina V, Efimov Sergey V, Terentieva Elena I, Vallejo-Roman Carmen M

机构信息

A. N. Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia.

Biological Faculty, Lomonosov Moscow State University, Moscow, Russia.

出版信息

Mitochondrial DNA B Resour. 2018 Oct 17;3(2):1110-1111. doi: 10.1080/23802359.2018.1501311.

Abstract

has been listed as an Endangered species in Russian Federation. The complete plastome was assembled from Next-Generation Sequencing data. It is 152,747 bp in length. It consists of a pair of Inverted Repeat regions (25,651 bp), separated by a small single copy region of 17,033 bp and a large single copy region of 84,412 bp. The plastome encoded 128 genes, including 83 protein coding genes, 37 tRNA, eight rRNA genes, four pseudogenes, and is characterized by loss of the and genes. Phylogenetic analysis of Paeoniaceae plastomes revealed that clustered with Eurasian peonies (section Paeoniae).

摘要

已被列为俄罗斯联邦的濒危物种。完整的质体基因组是根据二代测序数据组装而成。其长度为152,747 bp。它由一对反向重复区域(25,651 bp)组成,中间被一个17,033 bp的小单拷贝区域和一个84,412 bp的大单拷贝区域隔开。质体基因组编码128个基因,包括83个蛋白质编码基因、37个tRNA、8个rRNA基因、4个假基因,其特征是缺少 和 基因。芍药科质体基因组的系统发育分析表明, 与欧亚牡丹(芍药组)聚类在一起。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82df/7799943/925259d990f7/TMDN_A_1501311_F0001_B.jpg

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