• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

Traill和蒋英（夹竹桃科）的完整质体基因组序列

Complete plastome sequence of Traill and Tsiang (Apocynaceae).

作者信息

Tan Xin-Hang, Wang Jian-Hua, Zhao Kun-Kun, Zhu Zhi-Xin, Wang Hua-Feng

机构信息

Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Institute of Tropical Agriculture and Forestry Hainan University, Haikou, China.

出版信息

Mitochondrial DNA B Resour. 2018 Oct 26;3(2):1176-1177. doi: 10.1080/23802359.2018.1524720.

DOI:10.1080/23802359.2018.1524720
PMID:33474456
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800117/
Abstract

is the largest genus (about 350-450 species) within Apocynaceae. It is a subshrub or liana, epiphytic or epilithic. Most species grow in tropical and subtropical South and Southeast Asia. Here we report and characterize the complete plastid genome sequence of Traill Tsiang in an effort to provide genomic resources useful for promoting its systematics research. The complete plastome of is 161,565 bp in length, including two Inverted Repeat (IR) regions of 24,657 bp, a Large Single-Copy (LSC) region of 92,532 bp, and a Small Single-Copy (SSC) region of 19,719 bp. The plastome contains 115 genes, consisting of 81 unique protein-coding genes, 30 unique tRNA genes, and 4 unique rRNA genes. The overall A/T content in the plastome of is 62.40%. The complete plastome of is 162,989 bp in length, including two IR regions of 24,841 bp, a LSC region of 93,292 bp, and a SSC region of 20,015 bp. The plastome contains 115 genes, consisting of 81 unique protein-coding genes, 30 unique tRNA genes, and 4 unique rRNA genes. The overall A/T content in the plastome of is 62.30%. The complete plastome sequence of and will provide a useful resource for the conservation genetics of the two species as well as for the phylogenetic studies of .

摘要

是夹竹桃科中最大的属（约350 - 450种）。它是一种亚灌木或藤本植物，附生或石生。大多数物种生长在热带和亚热带的南亚和东南亚地区。在此，我们报道并表征了Traill Tsiang的完整质体基因组序列，旨在提供有助于促进其系统学研究的基因组资源。的完整质体基因组长度为161,565 bp，包括两个24,657 bp的反向重复（IR）区域、一个92,532 bp的大单拷贝（LSC）区域和一个19,719 bp的小单拷贝（SSC）区域。该质体基因组包含115个基因，由81个独特的蛋白质编码基因、30个独特的tRNA基因和4个独特的rRNA基因组成。的质体基因组中A/T的总体含量为62.40%。的完整质体基因组长度为162,989 bp，包括两个24,841 bp的IR区域、一个93,292 bp的LSC区域和一个20,015 bp的SSC区域。该质体基因组包含115个基因，由81个独特的蛋白质编码基因、30个独特的tRNA基因和4个独特的rRNA基因组成。的质体基因组中A/T的总体含量为62.30%。和的完整质体基因组序列将为这两个物种的保护遗传学以及的系统发育研究提供有用的资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e36/7800117/7338fa9119a4/TMDN_A_1524720_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e36/7800117/7338fa9119a4/TMDN_A_1524720_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e36/7800117/7338fa9119a4/TMDN_A_1524720_F0001_B.jpg

相似文献

1
Complete plastome sequence of Traill and Tsiang (Apocynaceae).Traill和蒋英（夹竹桃科）的完整质体基因组序列
Mitochondrial DNA B Resour. 2018 Oct 26;3(2):1176-1177. doi: 10.1080/23802359.2018.1524720.
2
Complete plastome sequence of (L. f.) R. Br. (Apocynaceae).罗布麻（Apocynaceae）（L. f.）R. Br. 的完整质体基因组序列。
Mitochondrial DNA B Resour. 2020 Jan 17;5(1):522-523. doi: 10.1080/23802359.2019.1710596.
3
Complete plastome sequences of Merr. and Merr. (Ebenaceae): two endemic species in Hainan Province, China.中国海南省两种特有物种——铁冬青（Ilex rotunda Thunb.）和毛冬青（Ilex pubescens Hook. et Arn.）的完整质体基因组序列 。 需注意，你提供的原文中“Merr. and Merr.”表述有误，推测应该是“Ilex rotunda Thunb. and Ilex pubescens Hook. et Arn.” ，以上译文是基于纠正后的内容翻译。
Mitochondrial DNA B Resour. 2018 Oct 30;3(2):1205-1207. doi: 10.1080/23802359.2018.1524724.
4
Complete plastome sequence of (Piperaceae): An endemic plant species in South China.胡椒科（Piperaceae）植物的完整质体基因组序列：中国南方的一种特有植物物种。
Mitochondrial DNA B Resour. 2018 Oct 27;3(2):1035-1036. doi: 10.1080/23802359.2018.1511850.
5
Complete plastome sequence of linn. (Dilleniaceae): an Endangered (EN) species in South China.莲（莲科）的完整质体基因组序列：中国南方的一种濒危（EN）物种。
Mitochondrial DNA B Resour. 2018 Nov 25;4(1):55-56. doi: 10.1080/23802359.2018.1536454. eCollection 2019.
6
Complete plastome sequence of (Erythropalaceae), an edible and medicinally important liana in China.中国一种具有食用和药用价值的重要藤本植物（铁青树科）的完整质体基因组序列
Mitochondrial DNA B Resour. 2018 Feb 1;3(1):139-140. doi: 10.1080/23802359.2017.1413435.
7
Complete plastome sequence of Hance (Linderniaceae), an endemic herb in South China.中国南方特有草本植物母草（母草科）的完整质体基因组序列
Mitochondrial DNA B Resour. 2019 Jul 10;4(2):2092-2093. doi: 10.1080/23802359.2019.1618220.
8
Complete plastome sequence of (Styracaeae): An endangered (EN) plant species endemic to China.安息香科（Styracaeae）植物的完整质体基因组序列：一种中国特有的濒危（EN）植物物种。
Mitochondrial DNA B Resour. 2018 Oct 27;3(2):1031-1032. doi: 10.1080/23802359.2018.1511847.
9
Complete plastome sequence of (Dipterocarpaceae): a vulnerable (VU) plant species in Southeast Asia.（龙脑香科）的完整质体基因组序列：东南亚一种易危（VU）植物物种。
Mitochondrial DNA B Resour. 2018 Oct 3;3(2):1145-1146. doi: 10.1080/23802359.2018.1522977.
10
Analysis of the Complete Plastomes of 31 Species of Group: Insights Into Their Comparative Genomics and Phylogenetic Relationships.31种[具体类群名称未给出]植物完整质体基因组分析：对其比较基因组学和系统发育关系的见解
Front Plant Sci. 2022 Feb 8;12:814833. doi: 10.3389/fpls.2021.814833. eCollection 2021.

引用本文的文献

1
The complete plastome of (Apocynaceae), an indigenous plant in Korea.韩国本土植物萝摩科（夹竹桃科）的完整质体基因组。
Mitochondrial DNA B Resour. 2022 Dec 9;7(12):2035-2039. doi: 10.1080/23802359.2022.2148489. eCollection 2022.
2
Analysis of the Complete Plastomes of 31 Species of Group: Insights Into Their Comparative Genomics and Phylogenetic Relationships.31种[具体类群名称未给出]植物完整质体基因组分析：对其比较基因组学和系统发育关系的见解
Front Plant Sci. 2022 Feb 8;12:814833. doi: 10.3389/fpls.2021.814833. eCollection 2021.
3
Plastome evolution and organisation in the Hoya group (Apocynaceae).

本文引用的文献

1
Complete plastome sequence of (Asparagaceae): a species considered "Vulnerable" in Southeast Asia.天门冬科（Asparagaceae）某物种的完整质体基因组序列：一种在东南亚被视为“易危”的物种。
Mitochondrial DNA B Resour. 2018 May 21;3(2):620-621. doi: 10.1080/23802359.2018.1473740.
2
The complete chloroplast genome sequence of Cynanchum auriculatum Royle ex Wight (Apocynaceae).白首乌（萝藦科）的完整叶绿体基因组序列
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4549-4550. doi: 10.3109/19401736.2015.1101557. Epub 2015 Dec 7.
3
Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach.
质体基因组进化与组织结构在球兰属（夹竹桃科）中的研究。
Sci Rep. 2021 Jul 15;11(1):14520. doi: 10.1038/s41598-021-93890-6.
4
Complete plastome sequence of (L. f.) R. Br. (Apocynaceae).罗布麻（Apocynaceae）（L. f.）R. Br. 的完整质体基因组序列。
Mitochondrial DNA B Resour. 2020 Jan 17;5(1):522-523. doi: 10.1080/23802359.2019.1710596.
直接从基因组下一代测序读段重建线粒体基因组——一种诱饵和迭代映射方法。
Nucleic Acids Res. 2013 Jul;41(13):e129. doi: 10.1093/nar/gkt371. Epub 2013 May 9.
4
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.RAxML-VI-HPC：基于最大似然法的系统发育分析，适用于数千个分类单元及混合模型。
Bioinformatics. 2006 Nov 1;22(21):2688-90. doi: 10.1093/bioinformatics/btl446. Epub 2006 Aug 23.
5
Automatic annotation of organellar genomes with DOGMA.使用DOGMA对细胞器基因组进行自动注释。
Bioinformatics. 2004 Nov 22;20(17):3252-5. doi: 10.1093/bioinformatics/bth352. Epub 2004 Jun 4.