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一种濒危树种(木兰科)的完整叶绿体基因组序列

Complete chloroplast genome sequence of an endangered tree species, (Magnoliaceae).

作者信息

Gao Jianmei, Song Yu, Zheng Baojiang

机构信息

Center for Integrative Conservation, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, China.

State Key Laboratory of Tree Genetics and Breeding, College of Life Sciences, Northeast Forestry University, Heilongjiang, China.

出版信息

Mitochondrial DNA B Resour. 2018 Oct 26;3(2):1261-1262. doi: 10.1080/23802359.2018.1532826.

DOI:10.1080/23802359.2018.1532826
PMID:33474485
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800644/
Abstract

The characteristic of complete chloroplast (cp) genome of , an endangered species in China, was first sequenced in this study. It showed a typical quadripartite structure with a length of 160,177 bp. It composed of a large single copy (LSC) region of 88,238 bp, a small single copy (SSC) region of 18,763 bp, and a pair of inverted repeat (IR) regions of 26,588 bp. Further maximum parsimony phylogenetic analysis was performed based on 38 complete plastomes from 30 magnoliids and basal angiosperm species. The result supported a close relationship among , , and .

摘要

本研究首次对中国濒危物种[物种名称未给出]的完整叶绿体(cp)基因组特征进行了测序。它呈现出典型的四分体结构,长度为160,177 bp。它由一个88,238 bp的大单拷贝(LSC)区域、一个18,763 bp的小单拷贝(SSC)区域和一对26,588 bp的反向重复(IR)区域组成。基于来自30种木兰类植物和基部被子植物物种的38个完整质体基因组进行了进一步的最大简约系统发育分析。结果支持了[物种名称未给出]、[物种名称未给出]、[物种名称未给出]和[物种名称未给出]之间的密切关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3510/7800644/be94887ca4fc/TMDN_A_1532826_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3510/7800644/be94887ca4fc/TMDN_A_1532826_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3510/7800644/be94887ca4fc/TMDN_A_1532826_F0001_B.jpg

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本文引用的文献

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Highly effective sequencing whole chloroplast genomes of angiosperms by nine novel universal primer pairs.利用九对新的通用引物对高效测序被子植物全叶绿体基因组。
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