Chen Yao, Yang Zhaoping
College of Life Sciences, Tarim University, Alaer, China.
Laboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou, China.
Mitochondrial DNA B Resour. 2018 Oct 31;3(2):1214-1215. doi: 10.1080/23802359.2018.1530964.
belongs to Amaranthaceae and distributes in North Europe, Asia, and North America. It is a medicinal plant with diuretic, antispasmodic, carminative, antidiarrhoeic properties, and a candidate plant for cancer treatment. However, few studies focused on its phylogeny, and its taxonomic status is still controversial. To better understand the evolution of this species, the complete plastome of was obtained by next-generation sequencing. It is the first plastome to be sequenced and reported in the genus . The plastome is 152,055 bp in length, which consists of a large single-copy region (LSC, 83,769 bp; GC content: 34.7%), a small single-copy region (SSC, 17,916 bp; GC content: 30.1%), and a pair of inverted repeat regions (IRs, 25,185 bp; GC content: 42.7%). It harbors 112 unique genes, including 78 protein-coding genes, 30 transfer RNA genes, and four ribosomal RNA genes with an overall G + C content of 36.8%. The phylogeny of Amaranthaceae based on the complete plastome sequences of 13 taxa showed that belong to subfamily Chenopodioideae. Chenopodioideae, together with Betoideae formed a sister clade to the three subfamilies (Salicornioideae, Suaedoideae, and Salsoloideae), and this sister clade formed an evolutionary sister clade to Amaranthoideae. Our data will largely enrich the genetic information of and facilitate future studies on its evolutionary status.
属于苋科,分布于北欧、亚洲和北美洲。它是一种具有利尿、解痉、驱风、止泻特性的药用植物,也是一种癌症治疗候选植物。然而,很少有研究关注其系统发育,其分类地位仍存在争议。为了更好地了解该物种的进化,通过下一代测序获得了其完整的叶绿体基因组。这是该属中第一个被测序和报道的叶绿体基因组。叶绿体基因组长度为152,055 bp,由一个大单拷贝区域(LSC,83,769 bp;GC含量:34.7%)、一个小单拷贝区域(SSC,17,916 bp;GC含量:30.1%)和一对反向重复区域(IRs,25,185 bp;GC含量:42.7%)组成。它包含112个独特基因,包括78个蛋白质编码基因、30个转运RNA基因和4个核糖体RNA基因,总体G + C含量为36.8%。基于13个分类群的完整叶绿体基因组序列的苋科系统发育显示,[具体物种]属于藜亚科。藜亚科与甜菜亚科一起形成了一个姐妹分支,与三个亚科(盐角草亚科、碱蓬亚科和猪毛菜亚科)相对,这个姐妹分支又与苋亚科形成了一个进化上的姐妹分支。我们的数据将极大地丰富[具体物种]的遗传信息,并促进对其进化地位的未来研究。