Key Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, No. 59 Mucai Street, Xiangfang District, Harbin 150030, PR China.
State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, PR China.
Int J Syst Evol Microbiol. 2021 Feb;71(2). doi: 10.1099/ijsem.0.004661.
A novel actinobacterium, designated strain NEAU-D13, was isolated from soil collected from Aohan Banner, Chifeng, Inner Mongolia Autonomous Region, China and characterized using a polyphasic approach. On the basis of 16S rRNA gene sequence analysis, strain NEAU-D13 belonged to the genus and shared the highest sequence similarity with JCM 14913 (99.17 %). Morphological and chemotaxonomic characteristics of the strain also supported its assignment to the genus . Cell walls contained -diaminopimelic acid as the diagnostic diamino acid and the whole-cell sugars were ribose and mannose. The phospholipid profile contained diphosphatidylglycerol, phosphatidylethanolamine, hydroxyphosphatidylethanolamine and phosphatidylinositol. The menaquinone was only MK-9(H). The major fatty acids were -C, C, -C, -C and -C. DNA G+C content was 68.71 mol%. Phylogenetic analysis using the 16S rRNA gene sequences showed that the strain formed a stable clade with JCM 14913 in the genus . Meanwhile, a combination of digital DNA-DNA hybridization results and some phenotypic characteristics demonstrated that strain NEAU-D13 could be distinguished from its closely related strain. Therefore, it is concluded that strain NEAU-D13 represents a novel species of the genus , for which the name sp. nov. is proposed, with NEAU-D13 (=CCTCC AA 2019089=JCM 33970) as the type strain.
一株新的放线菌,命名为 NEAU-D13 菌株,从中国内蒙古自治区阿鲁科尔沁旗采集的土壤中分离得到,并采用多相分类法进行了特征描述。根据 16S rRNA 基因序列分析,NEAU-D13 菌株属于 属,与 JCM 14913 的序列相似度最高(99.17%)。菌株的形态学和化学分类特征也支持其归入 属。细胞壁含有 -二氨基庚二酸作为特征性二氨基庚二酸,全细胞糖为核糖和甘露糖。磷脂谱含有双磷脂酰甘油、磷脂酰乙醇胺、羟基磷脂酰乙醇胺和磷脂酰肌醇。主要脂肪酸为 -C、C、-C、-C 和 -C。menaquinone 为 MK-9(H)。DNA G+C 含量为 68.71mol%。16S rRNA 基因序列的系统发育分析表明,该菌株与 JCM 14913 在 属中形成了一个稳定的分支。同时,数字 DNA-DNA 杂交结果和一些表型特征的组合表明,NEAU-D13 菌株与亲缘关系较近的菌株可区分开来。因此,结论是 NEAU-D13 菌株代表了 属的一个新种,建议命名为 sp. nov.,其模式菌株为 NEAU-D13(=CCTCC AA 2019089=JCM 33970)。