Suppr超能文献

众多的位置信息位。

The many bits of positional information.

机构信息

Institute of Science and Technology Austria, Am Campus 1, AT-3400 Klosterneuburg, Austria.

Joseph Henry Laboratories of Physics and the Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA

出版信息

Development. 2021 Feb 1;148(2):dev176065. doi: 10.1242/dev.176065.

Abstract

Half a century after Lewis Wolpert's seminal conceptual advance on how cellular fates distribute in space, we provide a brief historical perspective on how the concept of positional information emerged and influenced the field of developmental biology and beyond. We focus on a modern interpretation of this concept in terms of information theory, largely centered on its application to cell specification in the early embryo. We argue that a true physical variable (position) is encoded in local concentrations of patterning molecules, that this mapping is stochastic, and that the processes by which positions and corresponding cell fates are determined based on these concentrations need to take such stochasticity into account. With this approach, we shift the focus from biological mechanisms, molecules, genes and pathways to quantitative systems-level questions: where does positional information reside, how it is transformed and accessed during development, and what fundamental limits it is subject to?

摘要

半个世纪前,刘易斯·沃尔珀特(Lewis Wolpert)在细胞命运如何在空间中分配方面取得了开创性的概念性进展,我们提供了一个简短的历史视角,介绍了位置信息的概念是如何出现并影响发育生物学及其他领域的。我们专注于从信息论的角度对这一概念进行现代诠释,主要集中在其在早期胚胎中对细胞特化的应用上。我们认为,一个真正的物理变量(位置)被编码在模式分子的局部浓度中,这种映射是随机的,并且基于这些浓度确定位置和相应细胞命运的过程需要考虑到这种随机性。通过这种方法,我们将重点从生物学机制、分子、基因和途径转移到定量的系统水平问题上:位置信息驻留在何处,它在发育过程中是如何转化和访问的,以及它受到哪些基本限制?

相似文献

1
The many bits of positional information.众多的位置信息位。
Development. 2021 Feb 1;148(2):dev176065. doi: 10.1242/dev.176065.
2
Wolpert's French Flag: what's the problem?沃尔珀特氏法国国旗征:问题出在哪里?
Development. 2019 Dec 20;146(24):dev185967. doi: 10.1242/dev.185967.
3
On the dynamic nature of positional information.论位置信息的动态本质。
Bioessays. 2006 Nov;28(11):1102-11. doi: 10.1002/bies.20494.

引用本文的文献

5
Deriving a genetic regulatory network from an optimization principle.从优化原理推导遗传调控网络。
Proc Natl Acad Sci U S A. 2025 Jan 7;122(1):e2402925121. doi: 10.1073/pnas.2402925121. Epub 2025 Jan 3.
6
Finding the last bits of positional information.寻找最后的位置信息片段。
PRX Life. 2024 Jan-Mar;2(1). doi: 10.1103/prxlife.2.013016. Epub 2024 Mar 26.
7
Dynamics of positional information in the vertebrate neural tube.脊椎动物神经管中位置信息的动态变化
J R Soc Interface. 2024 Dec;21(221):20240414. doi: 10.1098/rsif.2024.0414. Epub 2024 Dec 11.
8
Stable developmental patterns of gene expression without morphogen gradients.不存在形态发生素梯度情况下基因表达的稳定发育模式。
PLoS Comput Biol. 2024 Dec 2;20(12):e1012555. doi: 10.1371/journal.pcbi.1012555. eCollection 2024 Dec.
10
Scale invariance in early embryonic development.胚胎早期发育中的尺度不变性。
Proc Natl Acad Sci U S A. 2024 Nov 12;121(46):e2403265121. doi: 10.1073/pnas.2403265121. Epub 2024 Nov 8.

本文引用的文献

1
Wolpert's French Flag: what's the problem?沃尔珀特氏法国国旗征:问题出在哪里?
Development. 2019 Dec 20;146(24):dev185967. doi: 10.1242/dev.185967.
3
Estimating information in time-varying signals.估计时变信号中的信息。
PLoS Comput Biol. 2019 Sep 3;15(9):e1007290. doi: 10.1371/journal.pcbi.1007290. eCollection 2019 Sep.
5
Optimal Decoding of Cellular Identities in a Genetic Network.遗传网络中细胞身份的最佳解码。
Cell. 2019 Feb 7;176(4):844-855.e15. doi: 10.1016/j.cell.2019.01.007. Epub 2019 Jan 31.
7
Distributed and dynamic intracellular organization of extracellular information.细胞外信息的分布式和动态细胞内组织。
Proc Natl Acad Sci U S A. 2018 Jun 5;115(23):6088-6093. doi: 10.1073/pnas.1716659115. Epub 2018 May 21.
9
Synthesizing developmental trajectories.合成发育轨迹。
PLoS Comput Biol. 2017 Sep 18;13(9):e1005742. doi: 10.1371/journal.pcbi.1005742. eCollection 2017 Sep.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验