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外周血 microRNAs 与 COVID-19 患者:方法学考虑、技术挑战与实践要点。

Peripheral blood microRNAs and the COVID-19 patient: methodological considerations, technical challenges and practice points.

机构信息

Translational Research in Respiratory Medicine, University Hospital Arnau de Vilanova and Santa Maria, IRBLleida, Lleida, Spain.

CIBER of Respiratory Diseases (CIBERES), Institute of Health Carlos III, Madrid, Spain.

出版信息

RNA Biol. 2021 May;18(5):688-695. doi: 10.1080/15476286.2021.1885188. Epub 2021 Feb 15.

Abstract

The COVID-19 emergency pandemic resulting from infection with SARS-CoV-2 represents a major threat to public health worldwide. There is an urgent clinical demand for easily accessible tools to address weaknesses and gaps in the management of COVID-19 patients. In this context, transcriptomic profiling of liquid biopsies, especially microRNAs (miRNAs), has recently emerged as a robust source of potential clinical indicators for medical decision-making. Nevertheless, the analysis of the circulating miRNA signature and its translation to clinical practice requires strict control of a wide array of methodological details. In this review, we indicate the main methodological aspects that should be addressed when evaluating the circulating miRNA profiles in COVID-19 patients, from preanalytical and analytical variables to the experimental design, impact of confounding, analysis of the data and interpretation of the findings, among others. Additionally, we provide practice points to ensure the rigour and reproducibility of miRNA-based biomarker investigations of this condition. ACE: angiotensin-converting enzyme; ARDS: acute respiratory distress syndrome; COVID-19: coronavirus disease 2019; ERDN: early Detection Research Network; LMWH: low molecular weight heparin; miRNA: microRNA; ncRNA: noncoding RNA; SARS-CoV-2: severe acute respiratory syndrome coronavirus-2; SOP: standard operating procedure.

摘要

由 SARS-CoV-2 感染引起的 COVID-19 紧急大流行是对全球公共卫生的重大威胁。临床急需易于使用的工具来解决 COVID-19 患者管理中的弱点和差距。在这种情况下,液体活检的转录组分析,特别是 microRNAs(miRNAs),最近已成为医学决策潜在临床指标的可靠来源。然而,分析循环 miRNA 特征及其转化为临床实践需要严格控制广泛的方法细节。在这篇综述中,我们指出了评估 COVID-19 患者循环 miRNA 谱时应解决的主要方法学方面,从分析前和分析变量到实验设计、混杂因素的影响、数据分析和结果解释等。此外,我们还提供了实践要点,以确保 miRNA 为基础的生物标志物研究的严谨性和可重复性。ACE:血管紧张素转换酶;ARDS:急性呼吸窘迫综合征;COVID-19:2019 年冠状病毒病;ERDN:早期检测研究网络;LMWH:低分子量肝素;miRNA:microRNA;ncRNA:非编码 RNA;SARS-CoV-2:严重急性呼吸综合征冠状病毒-2;SOP:标准操作程序。

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