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酒精使用障碍的表观遗传学——DNA 甲基化分析的最新进展综述。

Epigenetics of alcohol use disorder-A review of recent advances in DNA methylation profiling.

机构信息

Section on Clinical Genomics and Experimental Therapeutics, National Institute on Alcohol Abuse and Alcoholism, National Institutes of Health, Bethesda, Maryland, USA.

出版信息

Addict Biol. 2021 Nov;26(6):e13006. doi: 10.1111/adb.13006. Epub 2021 Feb 3.

Abstract

Alcohol use disorder (AUD) is a major contributor to morbidity and mortality worldwide. Although there is a heritable component, the etiology of AUD is complex and can involve environmental exposures like trauma and can be associated with many different patterns of alcohol consumption. Epigenetic modifications, which can mediate the influence of genetic variants and environmental variables on gene expression, have emerged as an important area of AUD research. Over the past decade, the number of studies investigating AUD and DNA methylation, a form of epigenetic modification, has grown rapidly. Yet we are still far from understanding how DNA methylation contributes to or reflects aspects of AUD. In this paper, we reviewed studies of DNA methylation and AUD and discussed how the field has evolved. We found that global DNA and candidate DNA methylation studies did not produce replicable results. To assess whether findings of epigenome-wide association studies (EWAS) were replicated, we aggregated significant findings across studies and identified 184 genes and 15 gene ontological pathways that were differentially methylated in at least two studies and four genes and three gene ontological pathways that were differentially methylated in three studies. These genes and pathways repeatedly found enrichment of immune processes, which is in line with recent developments suggesting that the immune system may be altered in AUD. Finally, we assess the current limitations of studies of DNA methylation and AUD and make recommendations on how to design future studies to resolve outstanding questions.

摘要

酒精使用障碍(AUD)是全球发病率和死亡率的主要原因。尽管有遗传因素,但 AUD 的病因复杂,可能涉及创伤等环境暴露,并且与许多不同的饮酒模式有关。表观遗传修饰可以调节遗传变异和环境变量对基因表达的影响,已成为 AUD 研究的一个重要领域。在过去的十年中,研究 AUD 和 DNA 甲基化(一种表观遗传修饰形式)的研究数量迅速增加。然而,我们仍远未了解 DNA 甲基化如何促成或反映 AUD 的各个方面。在本文中,我们回顾了 DNA 甲基化与 AUD 的研究,并讨论了该领域的发展。我们发现,全基因组和候选 DNA 甲基化研究并未产生可复制的结果。为了评估表观基因组关联研究(EWAS)的发现是否得到复制,我们对研究间的显著发现进行了汇总,确定了至少有两项研究中差异甲基化的 184 个基因和 15 个基因本体论途径,以及三项研究中差异甲基化的四个基因和三个基因本体论途径。这些基因和途径反复发现免疫过程的富集,这与最近的发展一致,表明 AUD 中免疫系统可能发生改变。最后,我们评估了 DNA 甲基化与 AUD 研究的当前局限性,并就如何设计未来的研究以解决悬而未决的问题提出了建议。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/faa9/8596445/67b4aed6cbf8/ADB-26-e13006-g001.jpg

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