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栽培品种黄牡丹(芍药科)的完整叶绿体基因组。

The complete chloroplast genome of cv. Hwang-Moran (Paeoniaceae).

作者信息

Gil Jinsu, Park Jin Hee, Yoon Ki Hoon, Park So Hyun, Lee Minjee, Lee Yi

机构信息

Department of Industrial Plant Science and Technology, Chungbuk National University, Cheongju, South Korea.

Nakdonggang National Institute of Biological Resources, Sangju, South Korea.

出版信息

Mitochondrial DNA B Resour. 2021 Jan 27;6(1):280-281. doi: 10.1080/23802359.2020.1860721.

Abstract

The complete chloroplast genome of cv. Hwang-Moran (PHM), a yellow flowering tree peony, was assembled and characterized from high-throughput next-generation sequencing data. The total length of the circular PHM chloroplast genome was 152,519 bp, including a large single-copy (LSC) region of 84,214 bp, a small single-copy (SSC) region of 17,026 bp, and a pair of inverted repeat regions (IRs) of 25,640 bp. The entire chloroplast genome contained 111 genes, including 77 protein-coding genes, 30 tRNAs, and four rRNAs. A phylogenetic tree constructed using the PHM and related chloroplast genome sequences revealed its close taxonomic relationship with within the genus .

摘要

通过高通量下一代测序数据组装并表征了黄色开花牡丹品种“黄牡丹”(PHM)的完整叶绿体基因组。环状的PHM叶绿体基因组全长152,519 bp,包括一个84,214 bp的大单拷贝(LSC)区域、一个17,026 bp的小单拷贝(SSC)区域和一对25,640 bp的反向重复区域(IRs)。整个叶绿体基因组包含111个基因,包括77个蛋白质编码基因、30个tRNA和4个rRNA。使用PHM和相关叶绿体基因组序列构建的系统发育树揭示了它与该属内其他物种的密切分类关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/99f8/7850342/089c874bd6eb/TMDN_A_1860721_F0001_B.jpg

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