Department of Biochemistry and Molecular Biology, School of Medicine, Indiana University, Indianapolis, IN, USA.
Department of Biochemistry, University of Wisconsin-Madison, Madison, WI, USA.
Nat Commun. 2021 Feb 12;12(1):996. doi: 10.1038/s41467-021-21278-1.
Cytoplasmic RNA-protein (RNP) granules have diverse biophysical properties, from liquid to solid, and play enigmatic roles in RNA metabolism. Nematode P granules are paradigmatic liquid droplet granules and central to germ cell development. Here we analyze a key P granule scaffolding protein, PGL-1, to investigate the functional relationship between P granule assembly and function. Using a protein-RNA tethering assay, we find that reporter mRNA expression is repressed when recruited to PGL-1. We determine the crystal structure of the PGL-1 N-terminal region to 1.5 Å, discover its dimerization, and identify key residues at the dimer interface. Mutations of those interface residues prevent P granule assembly in vivo, de-repress PGL-1 tethered mRNA, and reduce fertility. Therefore, PGL-1 dimerization lies at the heart of both P granule assembly and function. Finally, we identify the P granule-associated Argonaute WAGO-1 as crucial for repression of PGL-1 tethered mRNA. We conclude that P granule function requires both assembly and localized regulators.
细胞质 RNA-蛋白质 (RNP) 颗粒具有从液体到固体的多种物理特性,并在 RNA 代谢中发挥着神秘的作用。线虫 P 颗粒是典型的液滴颗粒,是生殖细胞发育的核心。在这里,我们分析了一个关键的 P 颗粒支架蛋白 PGL-1,以研究 P 颗粒组装和功能之间的功能关系。使用蛋白质-RNA 连接测定,我们发现当报告 mRNA 被招募到 PGL-1 时,其表达受到抑制。我们确定了 PGL-1 N 端区域的晶体结构,分辨率为 1.5Å,发现其二聚化,并确定了二聚体界面上的关键残基。这些界面残基的突变会阻止体内 P 颗粒的组装,解除 PGL-1 连接的 mRNA 的抑制,并降低生育能力。因此,PGL-1 二聚化是 P 颗粒组装和功能的核心。最后,我们确定 P 颗粒相关的 Argonaute WAGO-1 对于 PGL-1 连接的 mRNA 的抑制至关重要。我们得出结论,P 颗粒的功能既需要组装,也需要局部调节因子。