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Effect of N6-Methyladenosine Regulators on Progression and Prognosis of Triple-Negative Breast Cancer.

作者信息

Wang Shanshan, Zou Xuan, Chen Yajie, Cho William C, Zhou Xiang

机构信息

Cancer Institute, Fudan University Shanghai Cancer Center, Fudan University, Shanghai, China.

Department of Oncology, Shanghai Medical College, Fudan University, Shanghai, China.

出版信息

Front Genet. 2021 Jan 28;11:580036. doi: 10.3389/fgene.2020.580036. eCollection 2020.


DOI:10.3389/fgene.2020.580036
PMID:33584787
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7877483/
Abstract

The N6-methyladenosine (mA) modification plays a critical role in cancer development. Little is known about the mA modification in triple-negative breast cancer (TNBC), the most aggressive subtype of breast cancer. Thus, the prognostic value of mA RNA methylation in TNBC deserves exploration. The expression levels of the 13 mA methylation regulators were compared between the 98 TNBC tumor samples and normal tissue samples based on the transcriptome profiles from The Cancer Genome Atlas (TCGA). The association between the mA regulators and patients' overall survival was assessed by Kaplan-Meier survival analysis and Cox regression analysis. Lasso regression analysis was conducted to construct a prognostic model based on the mA methylation system. The prognostic performance of the identified model was validated in GSE88847 and GSE135565 datasets. A nomogram combining the TNM stage and the mA prognostic model was further constructed for the survival prediction of TNBC patients. The mA regulator genes were remarkably dysregulated in TNBC tumor tissues, with , and significantly up-regulated and , and significantly down-regulated ( < 0.01). The expression level of was an independent unfavorable prognostic factor ( = 3.327, = 0.006), while ( = 0.425, = 0.009) was an independent favorable prognostic factor for TNBC patients. A prognostic model consisting of and was therefore proposed displaying higher accuracy of risk prediction when combined with TNM stage with an AUC of 0.791. The prognostic value of the identified signature remained consistent within the two external validation datasets. The mA methylation regulators were significantly dysregulated in TNBC tissues and could constitute a novel prognostic signature for the survival prediction of TNBC patients.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e02/7877483/3a657d64518c/fgene-11-580036-g0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e02/7877483/695a36735de8/fgene-11-580036-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e02/7877483/e8b7bf5b6d50/fgene-11-580036-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e02/7877483/27e3109f1e38/fgene-11-580036-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e02/7877483/c813cd93c590/fgene-11-580036-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e02/7877483/987778d1921c/fgene-11-580036-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e02/7877483/c1cf363a0645/fgene-11-580036-g0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e02/7877483/3a657d64518c/fgene-11-580036-g0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e02/7877483/695a36735de8/fgene-11-580036-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e02/7877483/e8b7bf5b6d50/fgene-11-580036-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e02/7877483/27e3109f1e38/fgene-11-580036-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e02/7877483/c813cd93c590/fgene-11-580036-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e02/7877483/987778d1921c/fgene-11-580036-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e02/7877483/c1cf363a0645/fgene-11-580036-g0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e02/7877483/3a657d64518c/fgene-11-580036-g0007.jpg

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[2]
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[3]
YTHDC2 manipulates anti-tumoral macrophage polarization and predicts favorable outcomes in triple negative breast cancer.

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[4]
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Cell Biol Toxicol. 2025-2-26

[5]
METTL14 suppresses the expression of YAP1 and the stemness of triple-negative breast cancer.

J Exp Clin Cancer Res. 2024-11-20

[6]
N6-Methyladenosine methylation modification in breast cancer: current insights.

J Transl Med. 2024-10-28

[7]
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Biomark Res. 2024-9-17

[8]
The role of the ALKBH5 RNA demethylase in invasive breast cancer.

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[9]
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Breast Cancer Res. 2024-7-3

[10]
RNA modification gene WDR4 facilitates tumor progression and immunotherapy resistance in breast cancer.

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本文引用的文献

[1]
Role of RNA modifications in cancer.

Nat Rev Cancer. 2020-4-16

[2]
Effect of mA RNA Methylation Regulators on Malignant Progression and Prognosis in Renal Clear Cell Carcinoma.

Front Oncol. 2020-1-24

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Functions of N6-methyladenosine and its role in cancer.

Mol Cancer. 2019-12-4

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Marking RNA: m6A writers, readers, and functions in Arabidopsis.

J Mol Cell Biol. 2019-10-25

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The role of mA RNA methylation in human cancer.

Mol Cancer. 2019-5-29

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Changes of N6-methyladenosine modulators promote breast cancer progression.

BMC Cancer. 2019-4-5

[10]
The Critical Role of RNA mA Methylation in Cancer.

Cancer Res. 2019-3-20

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