Maheux Andrée F, Boudreau Dominique K, Abed Jehane Y, Bérubé Ève, Brodeur Stéphanie, Bernard Kathryn A, Hashimi Ameena, Ducrey Éloïse, Guay Émilie F, Raymond Frédéric, Corbeil Jacques, Domingo Marc-Christian, Roy Paul H, Boissinot Maurice, Tocheva Elitza I, Omar Rabeea F
Centre de recherche en infectiologie de l'Université Laval, Axe Maladies infectieuses et immunitaires, Centre de recherche du CHU de Québec-Université Laval, Québec City (Québec), Canada.
Present address: AFM water consulting, Québec City (Québec), Canada.
Int J Syst Evol Microbiol. 2019 Jun;71(3). doi: 10.1099/ijsem.0.004691. Epub 2021 Feb 15.
A rod-shaped, motile anaerobic bacterium, designated CCRI-22567, was isolated from a vaginal sample of a woman diagnosed with bacterial vaginosis and subjected to a polyphasic taxonomic study. The novel strain was capable of growth at 30-42 °C (optimum, 42 °C), at pH 5.5-8.5 (optimum, pH 7.0-7.5) and in the presence of 0-1.5 % (w/v) NaCl (optimally at 0.5 % NaCl). The phylogenetic trees based on 16S rRNA gene sequences showed that strain CCRI-22567 forms a distinct evolutionary lineage independent of other taxa in the family . Strain CCRI-22567 exhibited 90.1 % 16S rRNA gene sequence similarity to ACC19a and 89.7 % to subsp. ATCC 43716. The three closest organisms with an available whole genome were compared to strain CCRI-22567 for genomic relatedness assessment. The genomic average nucleotide identities (OrthoANIu) obtained with ACC19a, subsp. ATCC 43715 and ATCC 35896 were 71.8, 70.3 and 69.6 %, respectively. Strain CCRI-22567 contained C ω9 and C ω9 DMA as the major fatty acids. The DNA G+C content of strain CCRI-22567 based on its genome sequence was 33.8 mol%. On the basis of the phylogenetic, chemotaxonomic and other phenotypic properties, strain CCRI-22567 is considered to represent a new genus and species within the family , for which the name gen. nov., sp. nov., is proposed. The type strain of is CCRI-22567 (=LMG 31278=DSM 107614=CCUG 72594).
从一名被诊断为细菌性阴道病的女性阴道样本中分离出一株杆状、运动性厌氧细菌,命名为CCRI - 22567,并对其进行了多相分类学研究。该新菌株能够在30 - 42°C(最适温度为42°C)、pH 5.5 - 8.5(最适pH为7.0 - 7.5)以及0 - 1.5%(w/v)NaCl(最适NaCl浓度为0.5%)的条件下生长。基于16S rRNA基因序列构建的系统发育树表明,菌株CCRI - 22567形成了一个独立于该科其他分类单元的独特进化谱系。菌株CCRI - 22567与ACC19a的16S rRNA基因序列相似度为90.1%,与亚种ATCC 43716的相似度为89.7%。将三个有可用全基因组的亲缘关系最近的菌株与菌株CCRI - 22567进行基因组相关性评估。与ACC19a、亚种ATCC 43715和ATCC 35896的基因组平均核苷酸同源性(OrthoANIu)分别为71.8%、70.3%和69.6%。菌株CCRI - 22567以C ω9和C ω9 DMA作为主要脂肪酸。基于基因组序列,菌株CCRI - 22567的DNA G + C含量为33.8 mol%。基于系统发育、化学分类和其他表型特征,菌株CCRI - 22567被认为代表了该科内的一个新属和新种,为此提出新属名gen. nov.,新种名sp. nov.。gen. nov.的模式菌株为CCRI - 22567(=LMG 31278 = DSM 107614 = CCUG 72594)。