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特邀评论:治疗脱落——为因果预测辩护。

Invited Commentary: Treatment Drop-in-Making the Case for Causal Prediction.

出版信息

Am J Epidemiol. 2021 Oct 1;190(10):2015-2018. doi: 10.1093/aje/kwab030.

DOI:10.1093/aje/kwab030
PMID:33595073
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8485150/
Abstract

Clinical prediction models (CPMs) are often used to guide treatment initiation, with individuals at high risk offered treatment. This implicitly assumes that the probability quoted from a CPM represents the risk to an individual of an adverse outcome in absence of treatment. However, for a CPM to correctly target this estimand requires careful causal thinking. One problem that needs to be overcome is treatment drop-in: where individuals in the development data commence treatment after the time of prediction but before the outcome occurs. In this issue of the Journal, Xu et al. (Am J Epidemiol. 2021;190(10):2000-2014) use causal estimates from external data sources, such as clinical trials, to adjust CPMs for treatment drop-in. This represents a pragmatic and promising approach to address this issue, and it illustrates the value of utilizing causal inference in prediction. Building causality into the prediction pipeline can also bring other benefits. These include the ability to make and compare hypothetical predictions under different interventions, to make CPMs more explainable and transparent, and to improve model generalizability. Enriching CPMs with causal inference therefore has the potential to add considerable value to the role of prediction in healthcare.

摘要

临床预测模型(CPMs)常用于指导治疗的启动,对高风险个体给予治疗。这隐含地假设,CPM 中给出的概率代表了在没有治疗的情况下,个体发生不良结局的风险。然而,为了使 CPM 正确地针对这一目标估计量,需要进行仔细的因果思考。需要克服的一个问题是治疗插入:即开发数据中的个体在预测后但在结局发生之前开始治疗。在本期《美国流行病学杂志》上,Xu 等人(Am J Epidemiol. 2021;190(10):2000-2014)使用来自临床试验等外部数据源的因果估计来调整 CPM 以适应治疗插入。这是解决这一问题的一种实用且有前途的方法,它说明了在预测中利用因果推理的价值。在预测管道中构建因果关系还可以带来其他好处。这些好处包括能够在不同干预措施下进行和比较假设预测,使 CPM 更具解释性和透明性,并提高模型的通用性。因此,用因果推理丰富 CPM 有可能为预测在医疗保健中的作用带来巨大的价值。

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引用本文的文献

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Making predictions under interventions: a case study from the PREDICT-CVD cohort in New Zealand primary care.干预下的预测:来自新西兰初级保健中PREDICT-CVD队列的案例研究
Front Epidemiol. 2024 Apr 3;4:1326306. doi: 10.3389/fepid.2024.1326306. eCollection 2024.
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Prediction Under Interventions: Evaluation of Counterfactual Performance Using Longitudinal Observational Data.干预下的预测:使用纵向观察数据评估反事实性能。
Epidemiology. 2024 May 1;35(3):329-339. doi: 10.1097/EDE.0000000000001713. Epub 2024 Apr 18.
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Targeted validation: validating clinical prediction models in their intended population and setting.靶向验证:在目标人群和环境中验证临床预测模型。
Diagn Progn Res. 2022 Dec 22;6(1):24. doi: 10.1186/s41512-022-00136-8.
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Integrating artificial intelligence in bedside care for covid-19 and future pandemics.将人工智能融入新冠疫情和未来大流行的床边护理中。
BMJ. 2021 Dec 31;375:e068197. doi: 10.1136/bmj-2021-068197.

本文引用的文献

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Prediction of Cardiovascular Disease Risk Accounting for Future Initiation of Statin Treatment.考虑未来开始使用他汀类药物治疗的情况下预测心血管疾病风险。
Am J Epidemiol. 2021 Oct 1;190(10):2000-2014. doi: 10.1093/aje/kwab031.
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A scoping review of causal methods enabling predictions under hypothetical interventions.一项关于能够在假设干预下进行预测的因果方法的范围综述。
Diagn Progn Res. 2021 Feb 4;5(1):3. doi: 10.1186/s41512-021-00092-9.
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Generalizing randomized trial findings to a target population using complex survey population data.利用复杂调查人口数据将随机试验结果推广到目标人群。
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Counterfactual prediction is not only for causal inference.反事实预测并非仅用于因果推断。
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Prediction meets causal inference: the role of treatment in clinical prediction models.预测与因果推断:治疗在临床预测模型中的作用。
Eur J Epidemiol. 2020 Jul;35(7):619-630. doi: 10.1007/s10654-020-00636-1. Epub 2020 May 22.
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The long road to fairer algorithms.通往更公平算法的漫长道路。
Nature. 2020 Feb;578(7793):34-36. doi: 10.1038/d41586-020-00274-3.
7
From development to deployment: dataset shift, causality, and shift-stable models in health AI.从开发到部署:健康人工智能中的数据集偏移、因果关系和偏移稳定模型。
Biostatistics. 2020 Apr 1;21(2):345-352. doi: 10.1093/biostatistics/kxz041.
8
Explicit causal reasoning is needed to prevent prognostic models being victims of their own success.需要进行明确的因果推理,以防止预测模型成为自身成功的牺牲品。
J Am Med Inform Assoc. 2019 Dec 1;26(12):1675-1676. doi: 10.1093/jamia/ocz197.
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Dynamic models to predict health outcomes: current status and methodological challenges.预测健康结果的动态模型:现状与方法学挑战
Diagn Progn Res. 2018 Dec 18;2:23. doi: 10.1186/s41512-018-0045-2. eCollection 2018.
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Population-calibrated multiple imputation for a binary/categorical covariate in categorical regression models.对分类回归模型中二项式/分类协变量进行人群校准的多重插补。
Stat Med. 2019 Feb 28;38(5):792-808. doi: 10.1002/sim.8004. Epub 2018 Oct 16.