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本文引用的文献

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Charting the challenges behind the testing of COVID-19 in developing countries: Nepal as a case study.剖析发展中国家新冠病毒检测背后的挑战:以尼泊尔为例
Biosaf Health. 2020 Jun;2(2):53-56. doi: 10.1016/j.bsheal.2020.05.002. Epub 2020 May 13.
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Presence of SARS-Coronavirus-2 RNA in Sewage and Correlation with Reported COVID-19 Prevalence in the Early Stage of the Epidemic in The Netherlands.荷兰疫情早期污水中严重急性呼吸综合征冠状病毒2(SARS-CoV-2)RNA的存在及其与报告的COVID-19患病率的相关性
Environ Sci Technol Lett. 2020 May 20;7(7):511-516. doi: 10.1021/acs.estlett.0c00357. eCollection 2020 Jul 14.
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A Rapid, Highly Sensitive and Open-Access SARS-CoV-2 Detection Assay for Laboratory and Home Testing.一种用于实验室和家庭检测的快速、高灵敏度且开放获取的新型冠状病毒检测方法。
Front Mol Biosci. 2022 Apr 1;9:801309. doi: 10.3389/fmolb.2022.801309. eCollection 2022.
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Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions.SARS-CoV-2 感染的 shotgun 转录组、空间组学和等温分析揭示了独特的宿主反应、病毒多样化和药物相互作用。
Nat Commun. 2021 Mar 12;12(1):1660. doi: 10.1038/s41467-021-21361-7.
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On the information hidden in a classifier distribution.关于分类器分布中的信息隐藏。
Sci Rep. 2021 Jan 13;11(1):917. doi: 10.1038/s41598-020-79548-9.
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Case Report: Expanding the Genetic and Phenotypic Spectrum of Autosomal Recessive Spastic Ataxia of Charlevoix-Saguenay.病例报告:扩展魁北克-萨格奈常染色体隐性痉挛性共济失调的遗传和表型谱。
Front Genet. 2020 Dec 22;11:585136. doi: 10.3389/fgene.2020.585136. eCollection 2020.
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Early transmissibility assessment of the N501Y mutant strains of SARS-CoV-2 in the United Kingdom, October to November 2020.2020 年 10 月至 11 月英国 SARS-CoV-2 N501Y 突变株的早期传播能力评估。
Euro Surveill. 2021 Jan;26(1). doi: 10.2807/1560-7917.ES.2020.26.1.2002106.
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Amplification-free detection of SARS-CoV-2 with CRISPR-Cas13a and mobile phone microscopy.CRISPR-Cas13a 与手机显微镜无扩增检测 SARS-CoV-2。
Cell. 2021 Jan 21;184(2):323-333.e9. doi: 10.1016/j.cell.2020.12.001. Epub 2020 Dec 4.
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Fast detection of SARS-CoV-2 RNA via the integration of plasmonic thermocycling and fluorescence detection in a portable device.通过在便携式设备中整合等离子体热循环和荧光检测,快速检测 SARS-CoV-2 RNA。
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Analytical and Clinical Validation for RT-qPCR Detection of SARS-CoV-2 Without RNA Extraction.无需RNA提取的SARS-CoV-2逆转录定量聚合酶链反应检测的分析和临床验证
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用于 COVID-19 的分子诊断检测:概述。

Molecular diagnostic assays for COVID-19: an overview.

机构信息

Persian BayanGene Research and Training Center, Shiraz University of Medical Sciences, Shiraz, Iran.

Sir William Dunn School of Pathology, University of Oxford, Oxford, UK.

出版信息

Crit Rev Clin Lab Sci. 2021 Sep;58(6):385-398. doi: 10.1080/10408363.2021.1884640. Epub 2021 Feb 17.

DOI:10.1080/10408363.2021.1884640
PMID:33595397
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7898297/
Abstract

The coronavirus disease 2019 (COVID-19) pandemic has highlighted the cardinal importance of rapid and accurate diagnostic assays. Since the early days of the outbreak, researchers with different scientific backgrounds across the globe have tried to fulfill the urgent need for such assays, with many assays having been approved and with others still undergoing clinical validation. Molecular diagnostic assays are a major group of tests used to diagnose COVID-19. Currently, the detection of SARS-CoV-2 RNA by reverse transcription polymerase chain reaction (RT-PCR) is the most widely used method. Other diagnostic molecular methods, including CRISPR-based assays, isothermal nucleic acid amplification methods, digital PCR, microarray assays, and next generation sequencing (NGS), are promising alternatives. In this review, we summarize the technical and clinical applications of the different COVID-19 molecular diagnostic assays and suggest directions for the implementation of such technologies in future infectious disease outbreaks.

摘要

新型冠状病毒病 2019(COVID-19)大流行凸显了快速而准确的诊断检测的至关重要性。自疫情爆发早期以来,来自全球不同科学背景的研究人员一直试图满足对这类检测的迫切需求,其中许多检测已获得批准,还有一些仍在进行临床验证。分子诊断检测是用于诊断 COVID-19 的主要检测手段之一。目前,通过逆转录聚合酶链反应(RT-PCR)检测 SARS-CoV-2 RNA 是最广泛使用的方法。其他诊断性分子方法,包括基于 CRISPR 的检测方法、等温核酸扩增方法、数字 PCR、微阵列检测和下一代测序(NGS),是很有前途的替代方法。在这篇综述中,我们总结了不同 COVID-19 分子诊断检测的技术和临床应用,并为这些技术在未来传染病爆发中的应用提出了建议。