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活性位点环的变异可调节异丙苯双加氧酶的活性和选择性。

Active-site loop variations adjust activity and selectivity of the cumene dioxygenase.

作者信息

Heinemann Peter M, Armbruster Daniel, Hauer Bernhard

机构信息

Institute of Biochemistry and Technical Biochemistry, Department of Technical Biochemistry, University of Stuttgart, Stuttgart, Germany.

出版信息

Nat Commun. 2021 Feb 17;12(1):1095. doi: 10.1038/s41467-021-21328-8.

Abstract

Active-site loops play essential roles in various catalytically important enzyme properties like activity, selectivity, and substrate scope. However, their high flexibility and diversity makes them challenging to incorporate into rational enzyme engineering strategies. Here, we report the engineering of hot-spots in loops of the cumene dioxygenase from Pseudomonas fluorescens IP01 with high impact on activity, regio- and enantioselectivity. Libraries based on alanine scan, sequence alignments, and deletions along with a novel insertion approach result in up to 16-fold increases in activity and the formation of novel products and enantiomers. CAVER analysis suggests possible increases in the active pocket volume and formation of new active-site tunnels, suggesting additional degrees of freedom of the substrate in the pocket. The combination of identified hot-spots with the Linker In Loop Insertion approach proves to be a valuable addition to future loop engineering approaches for enhanced biocatalysts.

摘要

活性位点环在各种对催化至关重要的酶特性(如活性、选择性和底物范围)中发挥着重要作用。然而,它们的高灵活性和多样性使得将其纳入合理的酶工程策略具有挑战性。在此,我们报道了对荧光假单胞菌IP01的异丙苯双加氧酶环中的热点进行工程改造,这些热点对活性、区域选择性和对映选择性有很大影响。基于丙氨酸扫描、序列比对和缺失以及一种新颖的插入方法构建的文库,使活性提高了16倍,并形成了新的产物和对映体。CAVER分析表明活性口袋体积可能增大以及新的活性位点通道形成,这表明口袋中底物有更多的自由度。已确定的热点与环内连接子插入方法相结合,被证明是未来用于增强生物催化剂的环工程方法的一个有价值的补充。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0de4/7889853/c9fa89e3327e/41467_2021_21328_Fig1_HTML.jpg

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