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基于内容的脑 MRI 三个正交方向倾斜估计。

Content-Based Estimation of Brain MRI Tilt in Three Orthogonal Directions.

机构信息

Department of Computer Applications, Manipal Institute of Technology, Manipal Academy of Higher Education, Manipal, Karnataka, 576104, India.

Department of Neurology, National Institute of Mental Health and Neurosciences, Bengaluru, Karnataka, 560029, India.

出版信息

J Digit Imaging. 2021 Jun;34(3):760-771. doi: 10.1007/s10278-020-00400-7. Epub 2021 Feb 24.

Abstract

In a general scenario, the brain images acquired from magnetic resonance imaging (MRI) may experience tilt, distorting brain MR images. The tilt experienced by the brain MR images may result in misalignment during image registration for medical applications. Manually correcting (or estimating) the tilt on a large scale is time-consuming, expensive, and needs brain anatomy expertise. Thus, there is a need for an automatic way of performing tilt correction in three orthogonal directions (X, Y, Z). The proposed work aims to correct the tilt automatically by measuring the pitch angle, yaw angle, and roll angle in X-axis, Z-axis, and Y-axis, respectively. For correction of the tilt around the Z-axis (pointing to the superior direction), image processing techniques, principal component analysis, and similarity measures are used. Also, for correction of the tilt around the X-axis (pointing to the right direction), morphological operations, and tilt correction around the Y-axis (pointing to the anterior direction), orthogonal regression is used. The proposed approach was applied to adjust the tilt observed in the T1- and T2-weighted MR images. The simulation study with the proposed algorithm yielded an error of 0.40 ± 0.09°, and it outperformed the other existing studies. The tilt angle (in degrees) obtained is ranged from 6.2 ± 3.94, 2.35 ± 2.61, and 5 ± 4.36 in X-, Z-, and Y-directions, respectively, by using the proposed algorithm. The proposed work corrects the tilt more accurately and robustly when compared with existing studies.

摘要

在一般情况下,从磁共振成像(MRI)获得的脑图像可能会倾斜,扭曲脑 MRI 图像。脑 MRI 图像的倾斜可能会导致在医学应用的图像配准过程中出现对位不准。手动(或估计)大范围的倾斜非常耗时、昂贵,并且需要脑部解剖学专业知识。因此,需要一种自动的方法来在三个正交方向(X、Y、Z)上进行倾斜校正。本工作旨在通过分别测量 X 轴、Z 轴和 Y 轴上的俯仰角、偏航角和滚动角来自动校正倾斜。对于围绕 Z 轴(指向上方)的倾斜校正(指向上方),使用图像处理技术、主成分分析和相似性度量。此外,对于围绕 X 轴(指向右侧)的倾斜校正(指向右侧),使用形态学操作和围绕 Y 轴(指向前方)的倾斜校正(指向前方),使用正交回归。该方法应用于调整 T1 和 T2 加权 MRI 中观察到的倾斜。该算法的模拟研究产生的误差为 0.40±0.09°,优于其他现有研究。通过使用该算法,在 X、Z 和 Y 方向上获得的倾斜角度(以度为单位)分别为 6.2±3.94、2.35±2.61 和 5±4.36。与现有研究相比,该方法能更准确、更稳健地校正倾斜。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4e5b/8329139/783e2cc6e573/10278_2020_400_Fig1_HTML.jpg

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