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本文引用的文献
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NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
2
First Complete Genome Sequence of Staphylococcus xylosus, a Meat Starter Culture and a Host to Propagate Staphylococcus aureus Phages.木糖葡萄球菌的首个完整基因组序列，一种肉类发酵剂及金黄色葡萄球菌噬菌体的宿主菌
Genome Announc. 2014 Jul 10;2(4):e00671-14. doi: 10.1128/genomeA.00671-14.
3
Trimmomatic: a flexible trimmer for Illumina sequence data.Trimmomatic：一款适用于 Illumina 测序数据的灵活修剪工具。
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
4
Genome Sequence of Lactobacillus sakei subsp. sakei LS25, a Commercial Starter Culture Strain for Fermented Sausage.清酒乳杆菌清酒亚种LS25的基因组序列，一种用于发酵香肠的商业发酵剂菌株。
Genome Announc. 2013 Jul 11;1(4):e00475-13. doi: 10.1128/genomeA.00475-13.
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SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
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Genome analysis of the meat starter culture bacterium Staphylococcus carnosus TM300.肉用发酵剂细菌肉葡萄球菌TM300的基因组分析。
Appl Environ Microbiol. 2009 Feb;75(3):811-22. doi: 10.1128/AEM.01982-08. Epub 2008 Dec 5.
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Interactions between strains of Staphylococcus xylosus and Kocuria varians isolated from fermented meats.从发酵肉中分离出的木糖葡萄球菌和变异库克菌菌株之间的相互作用。
J Appl Microbiol. 2007 Sep;103(3):743-51. doi: 10.1111/j.1365-2672.2007.03315.x.
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Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research.Blast2GO：功能基因组学研究中用于注释、可视化和分析的通用工具。
Bioinformatics. 2005 Sep 15;21(18):3674-6. doi: 10.1093/bioinformatics/bti610. Epub 2005 Aug 4.
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InterProScan: protein domains identifier.InterProScan：蛋白质结构域识别工具。
Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W116-20. doi: 10.1093/nar/gki442.
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Contribution of starter cultures to the proteolytic process of a fermented non-dried whole muscle ham product.发酵非干腌整块肌肉火腿制品中发酵剂对蛋白水解过程的作用。
Int J Food Microbiol. 2004 Jun 1;93(2):219-30. doi: 10.1016/j.ijfoodmicro.2003.11.007.
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