Han Seahee, Sebastin Raveendar, Wang XiaoHan, Lee Kyung Jun, Cho Gyu-Taek, Hyun Do Yoon, Chung Jong-Wook
National Agrobiodiversity Center, National Institute of Agricultural Sciences, Rural Development Administration, Jeonju, South Korea.
Department of Industrial Plant Science and Technology, Chungbuk National University, Cheongju, South Korea.
Front Plant Sci. 2021 Feb 9;12:608559. doi: 10.3389/fpls.2021.608559. eCollection 2021.
Recently, within the Fabaceae family, the genus has been recognized for its vital role in sustainable agriculture. species are economically important grain and forage crops. However, the presence of complex morphological characteristics makes identification and recognition of native species difficult. In this study, the possibility of using DNA barcoding regions (ITS2, , and ) to distinguish among 19 taxa (59 accessions) found in South Korea was evaluated. The sequence alignment analysis revealed considerable nucleotide diversity (π) between the loci, in which ITS2 showed the highest mean interspecific distance, whereas there was no intraspecific variability among the barcode regions in 12 of the 19 taxa. Phylogenetic analysis of combined barcoding regions revealed well-resolved phylogeny with the highest species level discrimination. Combinations of barcode loci were also used in classification at the subgenera and section levels. The results revealed that the combined barcoding regions can be used effectively to differentiate the following species: var. , , , , , , , , , and . However, it is difficult to differentiate the species of , var. , , f. , , , var. , , and with the tested barcode regions. These species come under sect. and are found to be closely related or species that have recently undergone speciation; thus, it has limitation to distinguish with recommended barcodes. Hence, to differentiate the unclassified species, 39 morphological characteristics were investigated, in which 16 useful characteristics were selected for efficient classification. Finally, the 16 selected morphological useful traits efficiently differentiated all the species. In conclusion, a combination of barcoding loci together with morphological characteristics of this study efficiently discriminated all the Korean species.
最近,在豆科植物中,该属因其在可持续农业中的重要作用而受到认可。该属的物种是具有重要经济价值的谷物和饲料作物。然而,其复杂的形态特征使得本地物种的识别和鉴定变得困难。在本研究中,评估了使用DNA条形码区域(ITS2、[此处原文缺失两个条形码区域名称])区分在韩国发现的19个分类单元(59个种质)的可能性。序列比对分析显示各基因座之间存在相当大的核苷酸多样性(π),其中ITS2显示出最高的种间平均距离,而在19个分类单元中的12个中,条形码区域内没有种内变异。对组合条形码区域的系统发育分析显示,系统发育关系得到了很好的解析,具有最高的物种水平鉴别力。条形码基因座的组合也用于亚属和组水平的分类。结果表明,组合条形码区域可有效地用于区分以下物种:[此处原文缺失多个物种名称]变种、[此处原文缺失多个物种名称]、[此处原文缺失多个物种名称]、[此处原文缺失多个物种名称]、[此处原文缺失多个物种名称]、[此处原文缺失多个物种名称]、[此处原文缺失多个物种名称]、[此处原文缺失多个物种名称]、[此处原文缺失多个物种名称]和[此处原文缺失多个物种名称]。然而,使用测试的条形码区域很难区分[此处原文缺失多个物种名称]的物种、[此处原文缺失多个物种名称]变种、[此处原文缺失多个物种名称]、[此处原文缺失多个物种名称]变型、[此处原文缺失多个物种名称]、[此处原文缺失多个物种名称]、[此处原文缺失多个物种名称]变种、[此处原文缺失多个物种名称]和[此处原文缺失多个物种名称]。这些物种属于[此处原文缺失组名称]组,并且被发现是密切相关的或最近经历了物种形成的物种;因此,用推荐的条形码进行区分存在局限性。因此,为了区分未分类的物种,研究了39个形态特征,其中选择了16个有用特征用于有效分类。最后,16个选定的形态有用性状有效地区分了所有[此处原文缺失物种名称]物种。总之,本研究中的条形码基因座组合以及形态特征有效地鉴别了所有韩国[此处原文缺失物种名称]物种。