Wang Hanzeng, Leng Xue, Yang Jia, Zhang Mengqiu, Zeng Minzhen, Xu Xuemei, Wang Fude, Li Chenghao
State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, China.
Library of Northeast Forestry University, Harbin, China.
PeerJ. 2021 Feb 17;9:e10932. doi: 10.7717/peerj.10932. eCollection 2021.
The AT-hook motif nuclear-localized (AHL) family is a plant transcription factor family, which plays an important role in growth and development and stress responses. We identified and analyzed 37 genes in poplar (). Phylogenetic analysis classified the members into three subfamilies based on their conserved domain. All paralogous pairs evolved under purifying selection. The promoter analysis revealed the presence of stress-related and phytohormone-related -elements of the genes. Our analysis of the tissue-specific expression pattern of genes indicated their significance in tissue and organ development. Network-based prediction suggested that genes may interact with histone deacetylases (HDAC) and participate in the development of organs, such as roots. Drought negatively impacts plant growth and development. ABA is produced under osmotic stress condition, and it takes an important part in the stress response and tolerance of plants. Real-time quantitative PCR (qRT-PCR) showed that genes were induced by drought stress and ABA treatment. These insights into the expression of genes under stress provide a basis for gene functional analysis. Our study will help develop new breeding strategies to improve drought tolerance in poplar.
AT钩基序核定位(AHL)家族是一个植物转录因子家族,在生长发育和应激反应中发挥重要作用。我们在杨树中鉴定并分析了37个基因。系统发育分析根据其保守结构域将这些成员分为三个亚家族。所有旁系同源基因对都在纯化选择下进化。启动子分析揭示了这些基因存在与胁迫相关和与植物激素相关的元件。我们对这些基因组织特异性表达模式的分析表明它们在组织和器官发育中的重要性。基于网络的预测表明这些基因可能与组蛋白脱乙酰酶(HDAC)相互作用并参与器官如根的发育。干旱对植物生长发育有负面影响。脱落酸(ABA)在渗透胁迫条件下产生,并且在植物的应激反应和耐受性中起重要作用。实时定量PCR(qRT-PCR)表明这些基因受干旱胁迫和ABA处理诱导。这些关于胁迫条件下这些基因表达的见解为这些基因的功能分析提供了基础。我们的研究将有助于制定新的育种策略以提高杨树的耐旱性。