茄科雅各布斯氏植物的完整叶绿体基因组序列。
The complete chloroplast genome sequence of Jacq. (Solanaceae).
作者信息
Park Hyun-Seung, Lee Jundae, Lee Sang-Choon, Yang Tae-Jin, Yoon Jae Bok
机构信息
Department of Plant Science, Plant Genomics and Breeding Institute, and Research Institute for Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.
Department of Horticulture, Chonbuk National University, Jeonju, Republic of Korea.
出版信息
Mitochondrial DNA B Resour. 2016 Mar 28;1(1):164-165. doi: 10.1080/23802359.2016.1144113.
is one of the domesticated pepper species and well known for its distinctive pungency. The complete chloroplast genome sequence of was generated by assembly using next generation sequencing data. The chloroplast genome is 156 807 bp long, containing large single-copy region of 87 290 bp and small single-copy region of 17 911 bp separated by a pair of inverted repeats of 25 803 bp. A total of 113 genes were predicted including 79 protein-coding genes, 30 tRNA genes and four rRNA genes. Phylogenomic analysis revealed that chloroplast genome was most closely related to var. (American bird pepper), a wild progenitor of .
是驯化的辣椒品种之一，以其独特的辛辣味而闻名。通过使用下一代测序数据进行组装，生成了其完整的叶绿体基因组序列。叶绿体基因组长度为156807 bp，包含一个87290 bp的大单拷贝区域和一个17911 bp的小单拷贝区域，由一对25803 bp的反向重复序列隔开。总共预测到113个基因，包括79个蛋白质编码基因、30个tRNA基因和4个rRNA基因。系统基因组分析表明，其叶绿体基因组与作为的野生祖先的美国鸟椒（var.）关系最为密切。
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