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漆树科黄连木属植物的完整叶绿体基因组序列

The complete chloroplast genome sequence of Mill (Anacardiaceae).

作者信息

Lee Yun Sun, Kim Inseo, Kim Jin-Kyung, Park Jee Young, Joh Ho Jun, Park Hyun-Seung, Lee Hyun Oh, Lee Sang-Choon, Hur Young-Jin, Yang Tae-Jin

机构信息

Department of Plant Science, Plant Genomics and Breeding Institute, and Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.

Phyzen Genomics Institute, Seongnam, South Korea.

出版信息

Mitochondrial DNA B Resour. 2016 Sep 1;1(1):696-697. doi: 10.1080/23802359.2016.1222250.

Abstract

In this study, complete chloroplast genome sequences of was characterized by assembly using whole genome sequence data. The chloroplast genome of were 149,011bp long, which was comprised of a large single copy region of 96,882 bp, a small single copy region of 18,647bp, and a pair of inverted repeats of 16,741 bp. The genome contained 77 protein-coding genes, four rRNA genes and 30 tRNA genes. Phylogenetic tree revealed that was closely grouped with species, and belonging to the Anacardiaceae family.

摘要

在本研究中,通过使用全基因组序列数据进行组装,对[物种名称]的完整叶绿体基因组序列进行了表征。[物种名称]的叶绿体基因组长度为149,011bp,由一个96,882bp的大单拷贝区域、一个18,647bp的小单拷贝区域和一对16,741bp的反向重复序列组成。该基因组包含77个蛋白质编码基因、4个rRNA基因和30个tRNA基因。系统发育树显示,[物种名称]与漆树科的[其他物种名称]物种紧密聚类。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1728/7871870/ed11a5ddcff7/TMDN_A_1222250_F0001_B.jpg

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