Department of Biological Sciences, Ashoka University, Sonipat, Haryana 131029, India; email:
Annu Rev Biophys. 2021 May 6;50:419-445. doi: 10.1146/annurev-biophys-090420-083836. Epub 2021 Mar 1.
Single-molecule technologies have expanded our ability to detect biological events individually, in contrast to ensemble biophysical technologies, where the result provides averaged information. Recent developments in atomic force microscopy have not only enabled us to distinguish the heterogeneous phenomena of individual molecules, but also allowed us to view up to the resolution of a single covalent bond. Similarly, optical tweezers, due to their versatility and precision, have emerged as a potent technique to dissect a diverse range of complex biological processes, from the nanomechanics of ClpXP protease-dependent degradation to force-dependent processivity of motor proteins. Despite the advantages of optical tweezers, the time scales used in this technology were inconsistent with physiological scenarios, which led to the development of magnetic tweezers, where proteins are covalently linked with the glass surface, which in turn increases the observation window of a single biomolecule from minutes to weeks. Unlike optical tweezers, magnetic tweezers use magnetic fields to impose torque, which makes them convenient for studying DNA topology and topoisomerase functioning. Using modified magnetic tweezers, researchers were able to discover the mechanical role of chaperones, which support their substrate proteinsby pulling them during translocation and assist their native folding as a mechanical foldase. In this article, we provide a focused review of many of these new roles of single-molecule technologies, ranging from single bond breaking to complex chaperone machinery, along with the potential to design mechanomedicine, which would be a breakthrough in pharmacological interventions against many diseases.
单分子技术扩展了我们单独检测生物事件的能力,与集合生物物理技术形成对比,后者的结果提供了平均信息。原子力显微镜的最新发展不仅使我们能够区分单个分子的异质现象,还使我们能够观察到单个共价键的分辨率。同样,由于其多功能性和精度,光学镊子已成为剖析各种复杂生物过程的有力技术,从 ClpXP 蛋白酶依赖性降解的纳米力学到运动蛋白的力依赖性连续性。尽管光学镊子具有优势,但该技术中使用的时间尺度与生理场景不一致,这导致了磁镊的发展,其中蛋白质与玻璃表面共价连接,这反过来又将单个生物分子的观察窗口从分钟增加到数周。与光学镊子不同,磁镊使用磁场施加扭矩,这使得它们便于研究 DNA 拓扑和拓扑异构酶的功能。使用改良的磁镊,研究人员能够发现伴侣蛋白的机械作用,它们通过在易位过程中拉动底物蛋白并作为机械折叠酶协助其天然折叠来支持它们。在本文中,我们重点回顾了许多单分子技术的新作用,从单键断裂到复杂的伴侣蛋白机制,以及设计机械医学的潜力,这将是对抗许多疾病的药理学干预的突破。