Sheridan Paul O, Martin Jennifer C, Scott Karen P
Rowett Institute of Nutrition and Health, University of Aberdeen, Foresterhill, Aberdeen AB25 2ZD, UK.
Bio Protoc. 2020 Apr 5;10(7):e3575. doi: 10.21769/BioProtoc.3575.
and species of the human gut microbiota play an important role in the maintaince of human health, partly by producing butyrate, the main energy source of our colonic epithelial cells. However, our knowledge of the biochemistry and physiology of these bacteria has been limited by a lack of genetic manipulation techniques. Conjugative transposons previously introduced into species could not be easily modified, greatly limiting their applicability as genetic modification platforms. Modular plasmid shuttle vectors have previously been developed for species, which share a taxonomic order with and , raising the possibility that these vectors could be used in these organisms. Here, we describe an optimized conjugation protocol enabling the transfer of autonomously replicating plasmids from an donor strain into and . The modular nature of the plasmids and their ability to be maintained in the recipient bacterium by autonomous replication makes them ideal for investigating heterologous gene expression, and as a platform for other genetic tools including antisense RNA silencing or mobile group II interon gene disruption strategies.
人类肠道微生物群的物种在维持人类健康方面发挥着重要作用,部分原因是通过产生丁酸盐,这是我们结肠上皮细胞的主要能量来源。然而,由于缺乏基因操作技术,我们对这些细菌的生物化学和生理学的了解受到了限制。先前引入该物种的接合转座子不易修饰,极大地限制了它们作为基因修饰平台的适用性。模块化质粒穿梭载体先前已针对该物种开发,该物种与其他物种共享一个分类目,这增加了这些载体可用于这些生物体的可能性。在这里,我们描述了一种优化的接合方案,能够将自主复制的质粒从供体菌株转移到其他物种中。质粒的模块化性质及其通过自主复制在受体细菌中维持的能力使其成为研究异源基因表达的理想选择,并且作为包括反义RNA沉默或移动II组内含子基因破坏策略在内的其他遗传工具的平台。