Department of Pathology and Biomedical Science, University of Otago Christchurch, Christchurch, New Zealand.
Department of Biochemistry, Chemistry Institute, University of Sao Paulo, Sao Paulo, SP, Brazil.
J Biol Chem. 2021 Jan-Jun;296:100494. doi: 10.1016/j.jbc.2021.100494. Epub 2021 Mar 2.
Peroxiredoxin 2 (Prdx2) is a thiol peroxidase with an active site Cys (C52) that reacts rapidly with HO and other peroxides. The sulfenic acid product condenses with the resolving Cys (C172) to form a disulfide which is recycled by thioredoxin or GSH via mixed disulfide intermediates or undergoes hyperoxidation to the sulfinic acid. C172 lies near the C terminus, outside the active site. It is not established whether structural changes in this region, such as mixed disulfide formation, affect HO reactivity. To investigate, we designed mutants to cause minimal (C172S) or substantial (C172D and C172W) structural disruption. Stopped flow kinetics and mass spectrometry showed that mutation to Ser had minimal effect on rates of oxidation and hyperoxidation, whereas Asp and Trp decreased both by ∼100-fold. To relate to structural changes, we solved the crystal structures of reduced WT and C172S Prdx2. The WT structure is highly similar to that of the published hyperoxidized form. C172S is closely related but more flexible and as demonstrated by size exclusion chromatography and analytical ultracentrifugation, a weaker decamer. Size exclusion chromatography and analytical ultracentrifugation showed that the C172D and C172W mutants are also weaker decamers than WT, and small-angle X-ray scattering analysis indicated greater flexibility with partially unstructured regions consistent with C-terminal unfolding. We propose that these structural changes around C172 negatively impact the active site geometry to decrease reactivity with HO. This is relevant for Prdx turnover as intermediate mixed disulfides with C172 would also be disruptive and could potentially react with peroxides before resolution is complete.
过氧化物酶 2(Prdx2)是一种含巯基的过氧化物酶,其活性位点半胱氨酸(Cys52)可与 HO 和其他过氧化物快速反应。亚磺酸产物与解析半胱氨酸(Cys172)缩合形成二硫键,该二硫键可通过硫氧还蛋白或 GSH 通过混合二硫键中间产物或经历超氧化作用转化为磺酸来循环利用。C172 位于 C 末端附近,位于活性位点之外。目前尚不清楚该区域的结构变化(如混合二硫键形成)是否会影响 HO 的反应性。为了进行研究,我们设计了突变体以引起最小(C172S)或显著(C172D 和 C172W)的结构破坏。停流动力学和质谱分析表明,突变为丝氨酸对氧化和超氧化速率的影响最小,而天冬氨酸和色氨酸则降低了约 100 倍。为了与结构变化相关,我们解析了还原型 WT 和 C172S Prdx2 的晶体结构。WT 结构与已发表的超氧化形式高度相似。C172S 结构与之密切相关,但更具灵活性,如尺寸排阻色谱和分析超速离心法所示,其为较弱的十聚体。尺寸排阻色谱和分析超速离心法表明,C172D 和 C172W 突变体也比 WT 更弱的十聚体,并且小角度 X 射线散射分析表明,由于部分无规卷曲区域的灵活性更大,与 C 末端展开一致。我们提出,C172 周围的这些结构变化会对活性位点的几何形状产生负面影响,从而降低与 HO 的反应性。这与 Prdx 的周转率有关,因为与 C172 的中间混合二硫键也会产生干扰,并可能在完全解析之前与过氧化物反应。