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基于 RNA-Seq 的羊膜基质细胞与绒毛膜基质细胞的综合比较

Comprehensive Comparison of Amnion Stromal Cells and Chorion Stromal Cells by RNA-Seq.

机构信息

Smith and Nephew Inc., 7015 Albert Einstein Drive, Columbia, MD 21046, USA.

出版信息

Int J Mol Sci. 2021 Feb 14;22(4):1901. doi: 10.3390/ijms22041901.

Abstract

Mesenchymal stromal cells derived from the fetal placenta, composed of an amnion membrane, chorion membrane, and umbilical cord, have emerged as promising sources for regenerative medicine. Here, we used next-generation sequencing technology to comprehensively compare amniotic stromal cells (ASCs) with chorionic stromal cells (CSCs) at the molecular and signaling levels. Principal component analysis showed a clear dichotomy of gene expression profiles between ASCs and CSCs. Unsupervised hierarchical clustering confirmed that the biological repeats of ASCs and CSCs were able to respectively group together. Supervised analysis identified differentially expressed genes, such as , , and , and differentially expressed isoforms, such as and . Gene Ontology (GO) analysis showed that the GO terms of the extracellular matrix, angiogenesis, and cell adhesion were significantly enriched in CSCs. We further explored the factors associated with inflammation and angiogenesis using a multiplex assay. In comparison with ASCs, CSCs secreted higher levels of angiogenic factors, including angiogenin, VEGFA, HGF, and bFGF. The results of a tube formation assay proved that CSCs exhibited a strong angiogenic function. However, ASCs secreted two-fold more of an anti-inflammatory factor, TSG-6, than CSCs. In conclusion, our study demonstrated the differential gene expression patterns between ASCs and CSCs. CSCs have superior angiogenic potential, whereas ASCs exhibit increased anti-inflammatory properties.

摘要

来源于胎儿胎盘的间充质基质细胞,由羊膜、绒毛膜和脐带组成,已成为再生医学有前途的来源。在这里,我们使用下一代测序技术在分子和信号水平上全面比较了羊膜基质细胞(ASCs)和绒毛膜基质细胞(CSCs)。主成分分析显示 ASCs 和 CSCs 之间的基因表达谱明显二分。无监督层次聚类证实 ASCs 和 CSCs 的生物学重复能够分别聚集在一起。监督分析鉴定了差异表达基因,如、、和差异表达的同工型,如和。基因本体(GO)分析表明,GO 术语的细胞外基质、血管生成和细胞黏附在 CSCs 中显著富集。我们进一步使用多重分析探索了与炎症和血管生成相关的因素。与 ASCs 相比,CSCs 分泌更高水平的血管生成因子,包括血管生成素、VEGFA、HGF 和 bFGF。管形成试验的结果证明 CSCs 具有很强的血管生成功能。然而,ASCs 分泌的抗炎因子 TSG-6 是 CSCs 的两倍。总之,我们的研究表明 ASCs 和 CSCs 之间存在差异的基因表达模式。CSCs 具有优越的血管生成潜力,而 ASCs 则表现出更强的抗炎特性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d3b/7918623/69a7e7312aa7/ijms-22-01901-g001a.jpg

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