Luppi Andrea I, Stamatakis Emmanuel A
Division of Anesthesia, School of Clinical Medicine, University of Cambridge, Cambridge, United Kingdom.
Netw Neurosci. 2021 Feb 1;5(1):96-124. doi: 10.1162/netn_a_00170. eCollection 2021.
Network neuroscience employs graph theory to investigate the human brain as a complex network, and derive generalizable insights about the brain's network properties. However, graph-theoretical results obtained from network construction pipelines that produce idiosyncratic networks may not generalize when alternative pipelines are employed. This issue is especially pressing because a wide variety of network construction pipelines have been employed in the human network neuroscience literature, making comparisons between studies problematic. Here, we investigate how to produce networks that are maximally representative of the broader set of brain networks obtained from the same neuroimaging data. We do so by minimizing an information-theoretic measure of divergence between network topologies, known as the portrait divergence. Based on functional and diffusion MRI data from the Human Connectome Project, we consider anatomical, functional, and multimodal parcellations at three different scales, and 48 distinct ways of defining network edges. We show that the highest representativeness can be obtained by using parcellations in the order of 200 regions and filtering functional networks based on efficiency-cost optimization-though suitable alternatives are also highlighted. Overall, we identify specific node definition and thresholding procedures that neuroscientists can follow in order to derive representative networks from their human neuroimaging data.
网络神经科学运用图论将人类大脑作为一个复杂网络进行研究,并得出关于大脑网络特性的可推广见解。然而,从产生特异网络的网络构建流程中获得的图论结果,在采用其他流程时可能无法推广。这个问题尤为紧迫,因为人类网络神经科学文献中采用了各种各样的网络构建流程,这使得不同研究之间的比较存在问题。在这里,我们研究如何生成能够最大程度代表从相同神经成像数据中获得的更广泛脑网络集的网络。我们通过最小化网络拓扑之间的一种信息论散度度量(称为画像散度)来实现这一点。基于人类连接组计划的功能磁共振成像和扩散磁共振成像数据,我们考虑了三种不同尺度下的解剖、功能和多模态脑区划分,以及48种不同的定义网络边的方式。我们表明,通过使用约200个区域规模的脑区划分,并基于效率-成本优化对功能网络进行滤波,可以获得最高的代表性——不过也突出了合适的替代方法。总体而言,我们确定了神经科学家为从其人类神经成像数据中得出代表性网络可遵循的特定节点定义和阈值设定程序。