Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests, Ministry of Education, College of Plant Protection, Hainan University, Haikou 570228, China.
Fujian University Key Laboratory for Plant-Microbe Interaction, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Mol Plant Microbe Interact. 2021 Jul;34(7):862-865. doi: 10.1094/MPMI-12-20-0353-A. Epub 2021 Aug 19.
The causal agent of stem and root rot of cowpea, , is a widely distributed species of the genus. Here, we generate a high-quality complete genome assembly of PSY2020 (89.39 Mb, N 2.99 Mb) from China, using Oxford Nanopore Technologies (ONT) sequencing. The genome assembly completeness as evaluated by benchmarking universal single-copy orthologs was 94.51% at the eukaryote level. We identified 42.54% as repeat sequences and a total of 20,536 protein-encoding genes, of which 15,184 genes could be annotated. And we also identified 924 candidate RXLR effectors in the genome assembly. The described genome sequence will provide a valuable resource for better understanding of pathogenicity mechanisms of and help in uncovering phylogenetical classification of species.[Formula: see text] The author(s) have dedicated the work to the public domain under the Creative Commons CC0 "No Rights Reserved" license by waiving all of his or her rights to the work worldwide under copyright law, including all related and neighboring rights, to the extent allowed by law, 2021.
豇豆花叶病毒的致病因子是广泛分布的 属中的一个物种。在这里，我们使用 Oxford Nanopore Technologies（ONT）测序，从中国生成了高质量的完整基因组组装 PSY2020（89.39 Mb，N 2.99 Mb）。通过基准测试通用单拷贝直系同源物评估，基因组组装的完整性在真核生物水平为 94.51%。我们确定 42.54%为重复序列，总共 20,536 个蛋白质编码基因，其中 15,184 个基因可以被注释。我们还在基因组组装中鉴定了 924 个候选 RXLR 效应子。所描述的基因组序列将为更好地理解 和帮助揭示 物种的系统发育分类提供有价值的资源。[公式：见正文]作者已通过放弃其在全球版权法下对作品的所有权利（包括相关和相邻权利），将其作品在创作共用 CC0“无保留权利”许可下贡献到公有领域，2021 年。
