Ladokhin Alexey S, Kyrychenko Alexander, Rodnin Mykola V, Vasquez-Montes Victor
Department of Biochemistry and Molecular Biology, Kansas University Medical Center, Kansas City, KS, United States.
Institute of Chemistry and School of Chemistry, V. N. Karazin Kharkiv National University, Kharkiv, Ukraine.
Methods Enzymol. 2021;649:341-370. doi: 10.1016/bs.mie.2020.12.016. Epub 2021 Feb 2.
Diphtheria toxin is among many bacterial toxins that utilize the endosomal pathway of cellular entry, which is ensured by the bridging of the endosomal membrane by the toxin's translocation (T) domain. Endosomal acidification triggers a series of conformational changes of the T-domain, that take place first in aqueous and subsequently in membranous milieu. These rearrangements ultimately result in establishing membrane-inserted conformation(s) and translocation of the catalytic moiety of the toxin into the cytoplasm. We discuss here the strategy for combining site-selective labeling with various spectroscopic methods to characterize structural and thermodynamic aspects of protonation-dependent conformational switching and membrane insertion of the diphtheria toxin T-domain. Among the discussed methods are FRET, FCS and depth-dependent fluorescence quenching with lipid-attached bromine atoms and spin probes. The membrane-insertion pathway of the T-domain contains multiple intermediates and is governed by staggered pH-dependent transitions involving protonation of histidines and acidic residues. Presented data demonstrate that the lipid bilayer plays an active part in T-domain functioning and that the so-called Open-Channel State does not constitute the translocation pathway, but is likely to be a byproduct of the translocation. The spectroscopic approaches presented here are broadly applicable to many other systems of physiological and biomedical interest for which conformational changes can lead to membrane insertion (e.g., other bacterial toxins, host defense peptides, tumor-targeting pHLIP peptides and members of Bcl-2 family of apoptotic regulators).
白喉毒素是众多利用细胞内吞途径进入细胞的细菌毒素之一,毒素的转位(T)结构域在内体膜上形成桥接确保了这一过程。内体酸化会引发T结构域的一系列构象变化,这些变化首先发生在水相环境中,随后发生在膜相环境中。这些重排最终导致形成膜插入构象,并将毒素的催化部分转运到细胞质中。我们在此讨论将位点选择性标记与各种光谱方法相结合的策略,以表征白喉毒素T结构域质子化依赖性构象转换和膜插入的结构和热力学方面。所讨论的方法包括荧光共振能量转移(FRET)、荧光相关光谱(FCS)以及利用脂质连接的溴原子和自旋探针进行的深度依赖性荧光猝灭。T结构域的膜插入途径包含多个中间体,由涉及组氨酸和酸性残基质子化的交错pH依赖性转变所控制。现有数据表明,脂质双层在T结构域的功能中发挥着积极作用,所谓的开放通道状态并不构成转运途径,而可能是转运的副产物。本文介绍的光谱方法广泛适用于许多其他具有生理和生物医学意义的系统,对于这些系统,构象变化可导致膜插入(例如,其他细菌毒素、宿主防御肽、肿瘤靶向性pH低插入肽(pHLIP)以及凋亡调节因子Bcl-2家族成员)。