Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland.
Department of Geosciences and Geography, University of Helsinki, Helsinki, Finland.
ISME J. 2021 Sep;15(9):2547-2560. doi: 10.1038/s41396-021-00947-5. Epub 2021 Mar 12.
Soil bacteria are largely missing from future biodiversity assessments hindering comprehensive forecasts of ecosystem changes. Soil bacterial communities are expected to be more strongly driven by pH and less by other edaphic and climatic factors. Thus, alkalinisation or acidification along with climate change may influence soil bacteria, with subsequent influences for example on nutrient cycling and vegetation. Future forecasts of soil bacteria are therefore needed. We applied species distribution modelling (SDM) to quantify the roles of environmental factors in governing spatial abundance distribution of soil bacterial OTUs and to predict how future changes in these factors may change bacterial communities in a temperate mountain area. Models indicated that factors related to soil (especially pH), climate and/or topography explain and predict part of the abundance distribution of most OTUs. This supports the expectations that microorganisms have specific environmental requirements (i.e., niches/envelopes) and that they should accordingly respond to environmental changes. Our predictions indicate a stronger role of pH over other predictors (e.g. climate) in governing distributions of bacteria, yet the predicted future changes in bacteria communities are smaller than their current variation across space. The extent of bacterial community change predictions varies as a function of elevation, but in general, deviations from neutral soil pH are expected to decrease abundances and diversity of bacteria. Our findings highlight the need to account for edaphic changes, along with climate changes, in future forecasts of soil bacteria.
土壤细菌在未来的生物多样性评估中大部分缺失,这阻碍了对生态系统变化的全面预测。土壤细菌群落预计将更多地受到 pH 值的驱动,而较少受到其他土壤和气候因素的驱动。因此,随着气候变化,碱化或酸化可能会影响土壤细菌,随后可能会对养分循环和植被产生影响。因此,需要对土壤细菌进行未来预测。我们应用物种分布模型(SDM)来量化环境因素在控制土壤细菌 OTU 空间丰度分布中的作用,并预测这些因素未来的变化将如何改变温带山区的细菌群落。模型表明,与土壤(特别是 pH 值)、气候和/或地形有关的因素解释和预测了大多数 OTU 丰度分布的一部分。这支持了微生物具有特定环境要求(即生态位/包络)的预期,并且它们应该相应地对环境变化做出反应。我们的预测表明,pH 值在其他预测因子(如气候)对细菌分布的控制中起着更强的作用,但预测的未来细菌群落变化小于它们在空间上的当前变化。细菌群落变化预测的程度随海拔而变化,但总的来说,土壤 pH 值偏离中性预计会降低细菌的丰度和多样性。我们的研究结果强调了在未来的土壤细菌预测中需要考虑土壤变化以及气候变化的必要性。