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利用海氏肠杆菌进行系统代谢工程改造生产 1,3-丙二醇。

Systems metabolic engineering of Vibrio natriegens for the production of 1,3-propanediol.

机构信息

Key Laboratory of Industrial Biocatalysis (Ministry of Education), Department of Chemical Engineering, Tsinghua University, Beijing, 100084, China.

Key Laboratory of Industrial Biocatalysis (Ministry of Education), Department of Chemical Engineering, Tsinghua University, Beijing, 100084, China; Tsinghua Innovation Center in Dongguan, Dongguan, 523808, China; Center for Synthetic and Systems Biology, Tsinghua University, Beijing, 100084, China.

出版信息

Metab Eng. 2021 May;65:52-65. doi: 10.1016/j.ymben.2021.03.008. Epub 2021 Mar 12.

Abstract

The economic viability of current bio-production systems is often limited by its low productivity due to slow cell growth and low substrate uptake rate. The fastest-growing bacterium Vibrio natriegens is a highly promising next-generation workhorse of the biotechnology industry which can utilize various industrially relevant carbon sources with high substrate uptake rates. Here, we demonstrate the first systematic engineering example of V. natriegens for the heterologous production of 1,3-propanediol (1,3-PDO) from glycerol. Systems metabolic engineering strategies have been applied in this study to develop a superior 1,3-PDO producer, including: (1) heterologous pathway construction and optimization; (2) engineering cellular transcriptional regulators and global transcriptomic analysis; (3) enhancing intracellular reducing power by cofactor engineering; (4) reducing the accumulation of toxic intermediate by pathway engineering; (5) systematic engineering of glycerol oxidation pathway to eliminate byproduct formation. A final engineered strain can efficiently produce 1,3-PDO with a titer of 56.2 g/L, a yield of 0.61 mol/mol, and an average productivity of 2.36 g/L/h. The strategies described in this study would be useful for engineering V. natriegens as a potential chassis for the production of other useful chemicals and biofuels.

摘要

由于细胞生长缓慢和低底物摄取率,当前生物生产系统的经济可行性通常受到限制。生长最快的细菌Vibrio natriegens 是生物技术行业极具前景的下一代主力生物,它可以利用各种具有高底物摄取率的工业相关碳源。在这里,我们展示了 V. natriegens 异源生产 1,3-丙二醇(1,3-PDO)的第一个系统工程实例,利用甘油。本研究采用系统代谢工程策略,开发了一种优秀的 1,3-PDO 生产菌,包括:(1)异源途径的构建和优化;(2)细胞转录调控因子和全局转录组分析的工程设计;(3)通过辅酶工程增强细胞内还原能力;(4)通过途径工程减少有毒中间产物的积累;(5)甘油氧化途径的系统工程,消除副产物形成。最终工程菌株可高效生产 1,3-PDO,产量为 56.2 g/L,产率为 0.61 mol/mol,平均生产速率为 2.36 g/L/h。本研究中描述的策略对于工程化 V. natriegens 作为生产其他有用化学品和生物燃料的潜在底盘将是有用的。

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