Division of Microbiology and NCDs, ICMR-Regional Medical Research Centre, Odisha, India.
Department of Biology, Katholieke Universiteit Leuven, Leuven, Belgium; Center of Environment, Climate Change and Public Health, Utkal University, Vani Vihar, Odisha, India.
Biomed J. 2021 Mar;44(1):74-85. doi: 10.1016/j.bj.2020.12.002. Epub 2020 Dec 10.
The newly emerged SARS-CoV-2 strains from the coronavirus (CoV) family is causing one of the most disruptive pandemics of the past century. Developing antiviral drugs is a challenge for the scientific community and pharmaceutical industry. Given the health emergency, repurposing of existing antiviral, antiinflammatory or antimalarial drugs is an attractive option for controlling SARS-CoV-2 with drugs. However, phytochemicals selected based on ethnomedicinal information as well as in vitro antiviral studies could be promising as well. Here, we summarise the phytochemicals with reported anti-CoV activity, and further analyzed them computationally to accelerate validation for drug development against SARS-CoV-2. This systematic review started from the most potent phytocompounds (IC in μM) against SARS-CoV, followed by a cluster analysis to locate the most suitable lead(s). The advanced molecular docking used the crystallography structure of SARS-CoV-2-cysteine-like protease (SARS-CoV-2-3CL) as a target. In total, seventy-eight phytochemicals with anti-CoV activity against different strains in cellular assays, were selected for this computational study, and compared with two existing repurposed FDA-approved drugs: lopinavir and ritonavir. This review brings insights in the potential application of phytochemicals and their derivatives, which could guide researchers to develop safe drugs against SARS-CoV-2.
新型冠状病毒(CoV)家族中的 SARS-CoV-2 株正在引发本世纪最具破坏性的大流行之一。开发抗病毒药物是科学界和制药行业面临的挑战。鉴于目前的健康紧急情况,重新利用现有的抗病毒、抗炎或抗疟药物是用药物控制 SARS-CoV-2 的一种有吸引力的选择。然而,基于民族医学信息和体外抗病毒研究选择的植物化学物质也可能很有前景。在这里,我们总结了具有报道的抗 CoV 活性的植物化学物质,并进一步对其进行了计算分析,以加速针对 SARS-CoV-2 的药物开发验证。本系统评价从最有效的 SARS-CoV 植物化合物(IC 在 μM 范围内)开始,随后进行聚类分析以找到最合适的先导化合物。先进的分子对接使用 SARS-CoV-2 半胱氨酸蛋白酶(SARS-CoV-2-3CL)的晶体结构作为靶标。总共选择了 78 种具有抗 CoV 活性的植物化学物质,用于这项计算研究,并与两种现有的重新利用的 FDA 批准药物洛匹那韦和利托那韦进行了比较。该综述深入了解了植物化学物质及其衍生物的潜在应用,这可能为研究人员开发针对 SARS-CoV-2 的安全药物提供指导。