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一种用于模拟新冠病毒传播及应对措施影响的时间调制霍克斯过程。

A time-modulated Hawkes process to model the spread of COVID-19 and the impact of countermeasures.

作者信息

Garetto Michele, Leonardi Emilio, Torrisi Giovanni Luca

机构信息

Università degli Studi di Torino, C.so Svizzera 185, Torino, Italy.

Politecnico di Torino, C.so Duca degli Abruzzi 24, Torino, Italy.

出版信息

Annu Rev Control. 2021;51:551-563. doi: 10.1016/j.arcontrol.2021.02.002. Epub 2021 Mar 12.

DOI:10.1016/j.arcontrol.2021.02.002
PMID:33746561
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7953674/
Abstract

Motivated by the recent outbreak of coronavirus (COVID-19), we propose a stochastic model of epidemic temporal growth and mitigation based on a time-modulated Hawkes process. The model is sufficiently rich to incorporate specific characteristics of the novel coronavirus, to capture the impact of undetected, asymptomatic and super-diffusive individuals, and especially to take into account time-varying counter-measures and detection efforts. Yet, it is simple enough to allow scalable and efficient computation of the temporal evolution of the epidemic, and exploration of what-if scenarios. Compared to traditional compartmental models, our approach allows a more faithful description of virus specific features, such as distributions for the time spent in stages, which is crucial when the time-scale of control (e.g., mobility restrictions) is comparable to the lifetime of a single infection. We apply the model to the first and second wave of COVID-19 in Italy, shedding light onto several effects related to mobility restrictions introduced by the government, and to the effectiveness of contact tracing and mass testing performed by the national health service.

摘要

受近期冠状病毒(COVID-19)疫情爆发的启发,我们基于时间调制的霍克斯过程提出了一种疫情时间增长和缓解的随机模型。该模型足够丰富,能够纳入新型冠状病毒的特定特征,捕捉未检测到的、无症状的和超扩散个体的影响,尤其能够考虑随时间变化的应对措施和检测工作。然而,它又足够简单,能够对疫情的时间演变进行可扩展且高效的计算,并探索假设情景。与传统的 compartmental 模型相比,我们的方法能够更如实地描述病毒的特定特征,例如在各阶段所花费时间的分布,当控制时间尺度(例如行动限制)与单次感染的持续时间相当时,这一点至关重要。我们将该模型应用于意大利 COVID-19 的第一波和第二波疫情,揭示了与政府实施的行动限制以及国家卫生服务部门进行的接触者追踪和大规模检测的有效性相关的若干影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f913/7953674/59cead2a3639/gr11_lrg.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f913/7953674/b08c72479506/gr1_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f913/7953674/19c3217e55c3/gr2_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f913/7953674/c9b5194cfba6/gr3_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f913/7953674/0e34fce40fdd/gr4_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f913/7953674/ae4dbce35576/gr5_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f913/7953674/4271e1f9604f/gr6_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f913/7953674/c57915da97b6/gr7_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f913/7953674/7a984e379635/gr8_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f913/7953674/d78f2130b9a6/gr9_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f913/7953674/2a502c97045c/gr10_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f913/7953674/59cead2a3639/gr11_lrg.jpg

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2
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Epidemics. 2021 Dec;37:100528. doi: 10.1016/j.epidem.2021.100528. Epub 2021 Nov 20.
3
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追踪大流行情景下的机器学习模型:对预测大流行局部和全球演变的机器学习模型的系统综述
Netw Model Anal Health Inform Bioinform. 2022;11(1):40. doi: 10.1007/s13721-022-00384-0. Epub 2022 Oct 11.
4
COVID-19 epidemic control using short-term lockdowns for collective gain.通过短期封锁来控制新冠疫情以实现集体利益。
Annu Rev Control. 2021;52:573-586. doi: 10.1016/j.arcontrol.2021.10.017. Epub 2021 Nov 26.
5
Data-driven methods for present and future pandemics: Monitoring, modelling and managing.针对当前及未来大流行疾病的数据驱动方法:监测、建模与管理。
Annu Rev Control. 2021;52:448-464. doi: 10.1016/j.arcontrol.2021.05.003. Epub 2021 Jun 29.
Int J Forecast. 2022 Apr-Jun;38(2):505-520. doi: 10.1016/j.ijforecast.2021.07.001. Epub 2021 Jul 13.
4
A time-varying SIRD model for the COVID-19 contagion in Italy.用于意大利新冠疫情传播的时变SIRD模型。
Annu Rev Control. 2020;50:361-372. doi: 10.1016/j.arcontrol.2020.10.005. Epub 2020 Oct 26.
5
Estimation of incubation period distribution of COVID-19 using disease onset forward time: A novel cross-sectional and forward follow-up study.利用发病前时间估计 COVID-19 的潜伏期分布:一项新颖的横断面和前瞻性随访研究。
Sci Adv. 2020 Aug 14;6(33):eabc1202. doi: 10.1126/sciadv.abc1202. eCollection 2020 Aug.
6
Inferred duration of infectious period of SARS-CoV-2: rapid scoping review and analysis of available evidence for asymptomatic and symptomatic COVID-19 cases.推断 SARS-CoV-2 的传染期:对无症状和有症状 COVID-19 病例的现有证据进行快速范围审查和分析。
BMJ Open. 2020 Aug 5;10(8):e039856. doi: 10.1136/bmjopen-2020-039856.
7
The challenges of modeling and forecasting the spread of COVID-19.新冠病毒传播建模和预测面临的挑战。
Proc Natl Acad Sci U S A. 2020 Jul 21;117(29):16732-16738. doi: 10.1073/pnas.2006520117. Epub 2020 Jul 2.
8
Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe.估算非药物干预措施对欧洲 COVID-19 疫情的影响。
Nature. 2020 Aug;584(7820):257-261. doi: 10.1038/s41586-020-2405-7. Epub 2020 Jun 8.
9
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10
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Nat Med. 2020 Jun;26(6):855-860. doi: 10.1038/s41591-020-0883-7. Epub 2020 Apr 22.