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LINC00184通过ceRNA介导的miR-145抑制作用参与胃癌中ANGPT2的调控网络。

LINC00184 involved in the regulatory network of ANGPT2 via ceRNA mediated miR-145 inhibition in gastric cancer.

作者信息

Piao Hai-Yan, Guo Shuai, Jin Haoyi, Wang Yue, Zhang Jun

机构信息

Medical Oncology Department of Gastrointestinal cancer, Liaoning Province Cancer Hospital & Institute (Cancer Hospital of China Medical University), No. 44 Xiaoheyan Road, Dadong District, Shenyang City, Liaoning Province, China 110042.

Gastric Cancer Department, Liaoning Province Cancer Hospital & Institute (Cancer Hospital of China Medical University), No. 44 Xiaoheyan Road, Dadong District, Shenyang City, Liaoning Province, China 110042.

出版信息

J Cancer. 2021 Feb 22;12(8):2336-2350. doi: 10.7150/jca.49138. eCollection 2021.

Abstract

Disrupted gene levels are intimately correlated with the occurrence and prognosis of gastric cancer (GC). As genes do not function in isolation, we set out to investigate the possible relationship among mRNA and non-coding RNAs (ncRNAs). RNA sequencing from 406 cases of GC was acquired through the TCGA database. R packages were utilized to assess differential RNA expression. The competing endogenous RNA (ceRNA) network was predicted using miRcode, miRDB, mirTarBase, Target Scan and constructed by Cytoscape 3.6.1. GO enrichment analysis, KEGG pathway analysis, GSEA, and WGCNA were applied for pathway analysis. The expression of select candidate molecules was confirmed using western blot and RT-PCR in GC cells and tissues. CCK-8, EdU staining, and Transwell assays were conducted to assess the influence of candidate molecules on proliferation and invasion. The gain and loss-of-function were achieved by co-culture with sh-lncRNA, mimics and sh-mRNA. Luciferase reporters were created using the psiCHECK2 vector, and the relative luciferase activity was calculated. Using data from TCGA, we determined differentially expressed RNAs and created a ceRNA regulatory network. Interestingly, we identified a regulatory complex surrounding ANGPT2. We detected that ANGPT2 was highly expressed in GC, which correlated with a worse prognosis. Our findings indicated that ANGPT2 encourages growth, invasion, and epithelial-mesenchymal transition (EMT) in GC. Importantly, miR-145 inhibits ANGPT2 and abrogates its effects. Furthermore, LINC00184, a ceRNA, blocks miR-145, thereby improving ANGPT2-mediated carcinogenesis. Our findings indicate that the LINC00184/miR-145/ANGPT2 pathway has a crucial function in the development of GC and can act as a possible biomarker and targets for GC therapy.

摘要

基因水平的破坏与胃癌(GC)的发生和预后密切相关。由于基因并非独立发挥作用,我们着手研究mRNA与非编码RNA(ncRNA)之间可能存在的关系。通过TCGA数据库获取了406例GC病例的RNA测序数据。利用R软件包评估RNA差异表达。使用miRcode、miRDB、mirTarBase、Target Scan预测竞争性内源性RNA(ceRNA)网络,并通过Cytoscape 3.6.1构建该网络。应用GO富集分析、KEGG通路分析、GSEA和WGCNA进行通路分析。使用蛋白质免疫印迹法和RT-PCR在GC细胞和组织中验证了所选候选分子的表达。进行CCK-8、EdU染色和Transwell实验以评估候选分子对增殖和侵袭的影响。通过与sh-lncRNA、模拟物和sh-mRNA共培养实现功能获得和功能缺失。使用psiCHECK2载体构建荧光素酶报告基因,并计算相对荧光素酶活性。利用来自TCGA的数据,我们确定了差异表达的RNA并创建了一个ceRNA调控网络。有趣的是,我们发现了一个围绕ANGPT2的调控复合体。我们检测到ANGPT2在GC中高表达,这与较差的预后相关。我们的研究结果表明,ANGPT2促进GC的生长、侵袭和上皮-间质转化(EMT)。重要的是,miR-145抑制ANGPT2并消除其作用。此外,ceRNA LINC00184阻断miR-145,从而促进ANGPT2介导的致癌作用。我们的研究结果表明,LINC00184/miR-145/ANGPT2通路在GC的发展中具有关键作用,并且可以作为GC治疗的潜在生物标志物和靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2684/7974899/302a8bd5186d/jcav12p2336g001.jpg

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