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海洋盐单胞菌属,一株从红藻中分离到的利用褐藻胶的细菌。

Thalassotalea algicola sp. nov., an alginate-utilizing bacterium isolated from a red alga.

机构信息

Marine College, Shandong University, Weihai, 264209, Shandong, People's Republic of China.

出版信息

Antonie Van Leeuwenhoek. 2021 Jun;114(6):835-844. doi: 10.1007/s10482-021-01562-2. Epub 2021 Mar 27.

Abstract

A facultatively anaerobic bacterium, strain M1531, was isolated from a red alga (Porphyra) at coastal water in Weihai, China. Cells of the novel strain were Gram-stain-negative, rod-shaped, motile by means of a single polar flagellum and around 0.6-0.8 × 2.0-3.0 µm in size. Optimum growth occurred at 30 °C, with 2% (w/v) NaCl and at pH 6.5-7.0. On the basis of the result of phylogenetic analysis of the 16S rRNA gene sequence, stain M1531 had close relative with Thalassotalea euphylliae KCTC 42743 (96.9%). Genome sequencing revealed a genome size of 4,061,950 bp, a G + C content of 39.1 mol% and four protein-coding genes related to the degradation of alginate. According to the data obtained, strain M1531 shared ANI value below 95-96%, dDDH value below 23.8% with the closely related type species. Strain M1531 had Q-8 as the predominant isoprenoid quinone and possessed Summed Features 3 (C ω7c/C ω6c), C and Summed Features 8 (C ω7c/C ω6c) as the major fatty acids. The polar lipids of strain M1531 were identified as phosphatidylglycerol, phosphatidylethanolamine, one unidentified phospholipid, one unidentified aminolipid and four unidentified lipids. According to the results of the phenotypic, chemotaxonomic characterization, phylogenetic properties and genome analysis, strain M1531 represents a novel specie of the genus Thalassotalea, for which the name Thalassotalea algicola sp. nov. is proposed. The type strain is M1531 (= MCCC 1H00400 = KCTC 72865).

摘要

一株兼性厌氧菌,M1531 菌株,从中国威海沿海水域的一种红藻(紫菜)中分离得到。新菌株的细胞革兰氏阴性,杆状,通过单一极鞭毛运动,大小约为 0.6-0.8×2.0-3.0 µm。最佳生长条件为 30°C、2%(w/v)NaCl 和 pH6.5-7.0。根据 16S rRNA 基因序列的系统发育分析结果,M1531 菌株与 Thalassotalea euphylliae KCTC 42743(96.9%)密切相关。基因组测序显示基因组大小为 4,061,950 bp,G+C 含量为 39.1 mol%,有四个与褐藻胶降解相关的编码蛋白的基因。根据获得的数据,M1531 菌株与密切相关的模式种的 ANI 值低于 95-96%,dDDH 值低于 23.8%。M1531 菌株的主要类异戊二烯醌为 Q-8,主要脂肪酸为 Summed Features 3(C ω7c/C ω6c)、C 和 Summed Features 8(C ω7c/C ω6c)。M1531 菌株的极性脂为磷脂酰甘油、磷脂酰乙醇胺、一种未鉴定的磷脂、一种未鉴定的胺脂和四种未鉴定的脂。根据表型、化学分类特征、系统发育特性和基因组分析结果,M1531 菌株代表了 Thalassotalea 属的一个新种,命名为 Algicola Thalassotalea sp. nov.。模式菌株为 M1531(=MCCC 1H00400=KCTC 72865)。

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