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用于研究酶促降解聚对苯二甲酸乙二醇酯的分析方法。

Analytical methods for the investigation of enzyme-catalyzed degradation of polyethylene terephthalate.

机构信息

The Protein Factory 2.0', Dipartimento di Biotecnologie e Scienze della Vita, Università degli Studi dell'Insubria, Varese, Italy.

出版信息

FEBS J. 2021 Aug;288(16):4730-4745. doi: 10.1111/febs.15850. Epub 2021 May 14.

Abstract

The polyester PET (poly(ethylene terephthalate)) plastic is chemically inert and remarkably persistent, posing relevant and global pollution concerns due to its accumulation in ecosystems across the globe. In past years, research focused on identifying bacteria active on PET and on the specific enzymes responsible for its degradation. Here, the enzymatic degradation of PET can be considered as an 'erosion process' that takes place on the surface of an insoluble material and results in an unusual, substrate-limited kinetic condition. In this review, we report on the most suitable models to evaluate the kinetics of PET-hydrolyzing enzymes, which takes into consideration the amount of enzyme adsorbed on the substrate, the enzyme-accessible ester bonds, and the product inhibition effects. Careful kinetic analysis is especially relevant to compare enzymes from different sources and evolved variants generated by protein engineering studies as well. Furthermore, the analytical methods most suitable to screen natural bacteria and recombinant variant libraries generated by protein engineering have been also reported. These methods rely on different detection systems and are performed both on model compounds and on different PET samples (e.g., nanoparticles, microparticles, and waste products). All this meaningful information represents an optimal starting point and boosts the process of identifying systems able to biologically recycle PET waste products.

摘要

聚对苯二甲酸乙二醇酯(PET)塑料化学惰性且极为稳定,由于其在全球生态系统中的积累,对环境造成了相关的全球性污染问题。在过去的几年中,研究主要集中在鉴定能作用于 PET 的细菌以及负责其降解的特定酶上。在这里,PET 的酶促降解可以被视为一种发生在不溶性材料表面的“侵蚀过程”,导致了一种不寻常的、受限于底物的动力学条件。在这篇综述中,我们报告了评估 PET 水解酶动力学的最合适模型,该模型考虑了吸附在底物上的酶量、酶可及的酯键以及产物抑制效应。仔细的动力学分析对于比较来自不同来源的酶以及通过蛋白质工程研究产生的进化变体尤为重要。此外,还报告了筛选天然细菌和蛋白质工程产生的重组变体文库最适合的分析方法。这些方法依赖于不同的检测系统,并在模型化合物和不同的 PET 样品(例如纳米颗粒、微颗粒和废物)上进行。所有这些有意义的信息都代表了一个理想的起点,并推动了识别能够生物回收 PET 废物的系统的过程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb9b/8453989/d021353b3188/FEBS-288-4730-g011.jpg

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