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从叶垃圾堆肥中分离和鉴定一种新型巨型噬菌体及其对水稻幼苗烂根病的抑制作用。

Isolation and Characterization of a Novel Jumbo Phage from Leaf Litter Compost and Its Suppressive Effect on Rice Seedling Rot Diseases.

机构信息

Graduate School of Agricultural Science, Tohoku University, 468-1, Aramaki-Aza-Aoba, Sendai 980-0845, Japan.

Department of Applied Biological Sciences and Institute of Global Innovation Research, Tokyo University of Agriculture and Technology, Fuchu, Tokyo 183-8538, Japan.

出版信息

Viruses. 2021 Mar 31;13(4):591. doi: 10.3390/v13040591.

Abstract

Jumbo phages have DNA genomes larger than 200 kbp in large virions composed of an icosahedral head, tail, and other adsorption structures, and they are known to be abundant biological substances in nature. In this study, phages in leaf litter compost were screened for their potential to suppress rice seedling rot disease caused by the bacterium and a novel phage was identified in a filtrate-enriched suspension of leaf litter compost. The phage particles consisted of a rigid tailed icosahedral head and contained a DNA genome of 227,105 bp. The phage could lyse five strains of and six strains of . The phage was named jumbo phage FLC6. Proteomic tree analysis revealed that phage FLC6 belongs to the same clade as two jumbo phages, namely RSF1 and RSL2, which are members of the genus (family: Myoviridae; order: Caudovirales). Interestingly, FLC6 could also lyse two strains of , the causal agent of bacterial wilt, suggesting that FLC6 has a broad host range that may make it especially advantageous as a bio-control agent for several bacterial diseases in economically important crops. The novel jumbo phage FLC6 may enable leaf litter compost to suppress several bacterial diseases and may itself be useful for controlling plant diseases in crop cultivation.

摘要

巨型噬菌体的 DNA 基因组大于 200 kbp,其大型病毒粒子由二十面体头部、尾部和其他吸附结构组成,它们被认为是自然界中丰富的生物物质。在这项研究中,从叶垃圾堆肥中筛选出了能够抑制由细菌引起的水稻幼苗腐烂病的噬菌体,在叶垃圾堆肥的过滤液富集悬浮液中鉴定出了一种新型噬菌体。噬菌体颗粒由刚性长尾二十面体头部组成,含有 227105 bp 的 DNA 基因组。噬菌体可以裂解 5 株 和 6 株 。噬菌体被命名为 jumbo 噬菌体 FLC6。蛋白质组树分析表明,噬菌体 FLC6 与两个巨型 噬菌体 RSF1 和 RSL2 属于同一分支,它们是属(科:肌病毒科;目:尾病毒目)的成员。有趣的是,FLC6 还可以裂解两种细菌,即引起细菌性萎蔫病的病原体,这表明 FLC6 具有广泛的宿主范围,这可能使其作为几种经济上重要作物的几种细菌性疾病的生物防治剂特别有利。新型 jumbo 噬菌体 FLC6 可能使叶垃圾堆肥能够抑制几种细菌性疾病,并且本身可能对控制作物种植中的植物病害有用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a74c/8066314/cac0e54b6ee3/viruses-13-00591-g001.jpg

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