• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

单细胞RNA测序揭示皮下脂膜炎样T细胞淋巴瘤中恶性细胞和免疫微环境的特征

Single-Cell RNA-seq Reveals Characteristics of Malignant Cells and Immune Microenvironment in Subcutaneous Panniculitis-Like T-Cell Lymphoma.

作者信息

Li Zifeng, Wang Hongsheng, Dong Rui, Man Jie, Sun Li, Qian Xiaowen, Zhu Xiaohua, Cao Ping, Yu Yi, Le Jun, Fu Yang, Wang Ping, Jiang Wenjin, Shen Chen, Ma Yangyang, Chen Lian, Xu Yaochen, Shi Jiantao, Zhang Hui, Qian Maoxiang, Zhai Xiaowen

机构信息

Department of Hematology and Oncology, Children's Hospital of Fudan University, National Children's Medical Center, Shanghai, China.

Department of Pediatric Surgery, Children's Hospital of Fudan University, National Children's Medical Center, Shanghai, China.

出版信息

Front Oncol. 2021 Mar 18;11:611580. doi: 10.3389/fonc.2021.611580. eCollection 2021.

DOI:10.3389/fonc.2021.611580
PMID:33816243
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8013729/
Abstract

BACKGROUND

Subcutaneous panniculitis-like T-cell lymphoma (SPTCL) is a malignant primary T-cell lymphoma that is challenging to distinguish from autoimmune disorders and reactive panniculitides. Delay in diagnosis and a high misdiagnosis rate affect the prognosis and survival of patients. The difficulty of diagnosis is mainly due to an incomplete understanding of disease pathogenesis.

METHODS

We performed single-cell RNA sequencing of matched subcutaneous lesion tissue, peripheral blood, and bone marrow from a patient with SPTCL, as well as peripheral blood, bone marrow, lymph node, and lung tissue samples from healthy donors as normal controls. We conducted cell clustering, gene expression program identification, gene differential expression analysis, and cell-cell interaction analysis to investigate the ecosystem of SPTCL.

RESULTS

Based on gene expression profiles in a single-cell resolution, we identified and characterized the malignant cells and immune subsets from a patient with SPTCL. Our analysis showed that SPTCL malignant cells expressed a distinct gene signature, including chemokines families, cytotoxic proteins, T cell immune checkpoint molecules, and the immunoglobulin family. By comparing with normal T cells, we identified potential novel markers for SPTCL (e.g., ) specifically differentially expressed in the malignant cells. We also found that macrophages and fibroblasts dominated the cell-cell communication landscape with the SPTCL malignant cells.

CONCLUSIONS

This work offers insight into the heterogeneity of subcutaneous panniculitis-like T-cell lymphoma, providing a better understanding of the transcription characteristics and immune microenvironment of this rare tumor.

摘要

背景

皮下脂膜炎样T细胞淋巴瘤(SPTCL)是一种恶性原发性T细胞淋巴瘤,难以与自身免疫性疾病和反应性脂膜炎相区分。诊断延迟和高误诊率影响患者的预后和生存。诊断困难主要是由于对疾病发病机制的认识不完整。

方法

我们对一名SPTCL患者的皮下病变组织、外周血和骨髓进行了单细胞RNA测序,并将健康供体的外周血、骨髓、淋巴结和肺组织样本作为正常对照。我们进行了细胞聚类、基因表达程序鉴定、基因差异表达分析和细胞间相互作用分析,以研究SPTCL的生态系统。

结果

基于单细胞分辨率的基因表达谱,我们从一名SPTCL患者中鉴定并表征了恶性细胞和免疫亚群。我们的分析表明,SPTCL恶性细胞表达了独特的基因特征,包括趋化因子家族、细胞毒性蛋白、T细胞免疫检查点分子和免疫球蛋白家族。通过与正常T细胞比较,我们确定了SPTCL潜在的新型标志物(例如 ),这些标志物在恶性细胞中特异性差异表达。我们还发现巨噬细胞和成纤维细胞在与SPTCL恶性细胞的细胞间通讯格局中占主导地位。

结论

这项工作深入了解了皮下脂膜炎样T细胞淋巴瘤的异质性,有助于更好地理解这种罕见肿瘤的转录特征和免疫微环境。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dd9/8013729/4ffed6c1de00/fonc-11-611580-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dd9/8013729/20fc8c674efc/fonc-11-611580-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dd9/8013729/ae07b942bed8/fonc-11-611580-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dd9/8013729/003abb562e90/fonc-11-611580-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dd9/8013729/4ffed6c1de00/fonc-11-611580-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dd9/8013729/20fc8c674efc/fonc-11-611580-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dd9/8013729/ae07b942bed8/fonc-11-611580-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dd9/8013729/003abb562e90/fonc-11-611580-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dd9/8013729/4ffed6c1de00/fonc-11-611580-g004.jpg

相似文献

1
Single-Cell RNA-seq Reveals Characteristics of Malignant Cells and Immune Microenvironment in Subcutaneous Panniculitis-Like T-Cell Lymphoma.单细胞RNA测序揭示皮下脂膜炎样T细胞淋巴瘤中恶性细胞和免疫微环境的特征
Front Oncol. 2021 Mar 18;11:611580. doi: 10.3389/fonc.2021.611580. eCollection 2021.
2
Subcutaneous panniculitis-like T-cell lymphoma, lupus erythematosus profundus, and overlapping cases: molecular characterization through the study of 208 genes.皮下脂膜炎样 T 细胞淋巴瘤、深部狼疮和重叠病例:通过研究 208 个基因进行分子特征分析。
Leuk Lymphoma. 2021 Sep;62(9):2130-2140. doi: 10.1080/10428194.2021.1901098. Epub 2021 May 8.
3
Different Mutational Profiles of Subcutaneous Panniculitis-like T-cell Lymphoma and Lupus Panniculitis: An Additional Case Series.皮下脂膜炎样T细胞淋巴瘤和狼疮性脂膜炎的不同突变谱:另一病例系列
Actas Dermosifiliogr. 2025 Mar;116(3):210-217. doi: 10.1016/j.ad.2024.06.006. Epub 2024 Jul 18.
4
Clinical analysis of 10 cases with subcutaneous panniculitis-like T-cell lymphoma and tissue AURKA expression.皮下脂膜炎样 T 细胞淋巴瘤及组织 AURKA 表达 10 例临床分析。
Skin Res Technol. 2024 Aug;30(8):e13899. doi: 10.1111/srt.13899.
5
Survival of Subcutaneous Panniculitis-Like T-Cell Lymphoma and Peripheral T-Cell Lymphoma Not Otherwise Specified: A Propensity-Matched Analysis of the Surveillance, Epidemiology, and End Results Database.皮下脂膜炎样T细胞淋巴瘤和未另行指定的外周T细胞淋巴瘤的生存情况:监测、流行病学和最终结果数据库的倾向匹配分析
Clin Lymphoma Myeloma Leuk. 2016 Jul;16(7):373-8. doi: 10.1016/j.clml.2016.04.015. Epub 2016 May 4.
6
High-throughput Sequencing of Subcutaneous Panniculitis-like T-Cell Lymphoma Reveals Candidate Pathogenic Mutations.皮下脂膜炎样T细胞淋巴瘤的高通量测序揭示候选致病突变
Appl Immunohistochem Mol Morphol. 2019 Nov/Dec;27(10):740-748. doi: 10.1097/PAI.0000000000000683.
7
Subcutaneous Panniculitis-Like T-Cell Lymphoma With Granulomas as the Predominant Feature.以肉芽肿为主要特征的皮下脂膜炎样T细胞淋巴瘤。
Am J Dermatopathol. 2019 Sep;41(9):667-670. doi: 10.1097/DAD.0000000000001402.
8
Useful Parameters for Distinguishing Subcutaneous Panniculitis-like T-Cell Lymphoma From Lupus Erythematosus Panniculitis.用于区分皮下脂膜炎样T细胞淋巴瘤与红斑狼疮性脂膜炎的有用参数。
Am J Surg Pathol. 2016 Jun;40(6):745-54. doi: 10.1097/PAS.0000000000000596.
9
[Research Progression of Subcutaneous Panniculitis-like T-Cell Lymphoma--Review].[皮下脂膜炎样T细胞淋巴瘤的研究进展——综述]
Zhongguo Shi Yan Xue Ye Xue Za Zhi. 2021 Feb;29(1):297-300. doi: 10.19746/j.cnki.issn.1009-2137.2021.01.050.
10
Subcutaneous panniculitis-like T-cell lymphoma (SPTCL) with hemophagocytosis (HPS): successful treatment using high-dose chemotherapy (BFM-NHL & ALL-90) and autologous peripheral blood stem cell transplantation.伴有噬血细胞增多症(HPS)的皮下脂膜炎样T细胞淋巴瘤(SPTCL):采用大剂量化疗(BFM-NHL & ALL-90方案)及自体外周血干细胞移植治疗成功
J Clin Exp Hematop. 2013;53(2):135-40. doi: 10.3960/jslrt.53.135.

引用本文的文献

1
An Update on Single-Cell RNA Sequencing in Illuminating Disease Mechanisms of Cutaneous T-Cell Lymphoma.单细胞RNA测序在揭示皮肤T细胞淋巴瘤疾病机制方面的最新进展
Cancers (Basel). 2025 Sep 5;17(17):2921. doi: 10.3390/cancers17172921.
2
Characterization of the malignant cells and microenvironment of infantile fibrosarcoma via single-cell RNA sequencing.通过单细胞RNA测序对婴儿纤维肉瘤的恶性细胞和微环境进行表征。
Transl Pediatr. 2024 Apr 30;13(4):596-609. doi: 10.21037/tp-24-66. Epub 2024 Apr 29.
3
Biology and genetics of extranodal mature T-cell and NKcell lymphomas and lymphoproliferative disorders.

本文引用的文献

1
CellPhoneDB: inferring cell-cell communication from combined expression of multi-subunit ligand-receptor complexes.CellPhoneDB:从多亚基配体-受体复合物的综合表达推断细胞间通讯。
Nat Protoc. 2020 Apr;15(4):1484-1506. doi: 10.1038/s41596-020-0292-x. Epub 2020 Feb 26.
2
High-throughput Sequencing of Subcutaneous Panniculitis-like T-Cell Lymphoma Reveals Candidate Pathogenic Mutations.皮下脂膜炎样T细胞淋巴瘤的高通量测序揭示候选致病突变
Appl Immunohistochem Mol Morphol. 2019 Nov/Dec;27(10):740-748. doi: 10.1097/PAI.0000000000000683.
3
Single-cell transcriptomics of human T cells reveals tissue and activation signatures in health and disease.
结外成熟 T 细胞和 NK 细胞淋巴瘤和淋巴增殖性疾病的生物学和遗传学。
Haematologica. 2023 Dec 1;108(12):3261-3277. doi: 10.3324/haematol.2023.282718.
4
The role of tumor immune microenvironment in chordoma: promising immunotherapy strategies.肿瘤免疫微环境在软骨肉瘤中的作用:有前途的免疫治疗策略。
Front Immunol. 2023 Sep 1;14:1257254. doi: 10.3389/fimmu.2023.1257254. eCollection 2023.
5
Advances in single-cell RNA sequencing and its applications in cancer research.单细胞 RNA 测序技术的进展及其在癌症研究中的应用。
J Hematol Oncol. 2023 Aug 24;16(1):98. doi: 10.1186/s13045-023-01494-6.
6
Function and characteristics of TIM‑4 in immune regulation and disease (Review).TIM-4 在免疫调节和疾病中的功能和特性(综述)。
Int J Mol Med. 2023 Feb;51(2). doi: 10.3892/ijmm.2022.5213. Epub 2022 Dec 16.
7
Revealing the intratumoral heterogeneity of non-DS acute megakaryoblastic leukemia in single-cell resolution.以单细胞分辨率揭示非唐氏综合征急性巨核细胞白血病的肿瘤内异质性。
Front Oncol. 2022 Aug 8;12:915833. doi: 10.3389/fonc.2022.915833. eCollection 2022.
8
N-Glycosylation at Asn291 Stabilizes TIM-4 and Promotes the Metastasis of NSCLC.天冬酰胺291位点的N-糖基化修饰可稳定TIM-4并促进非小细胞肺癌转移。
Front Oncol. 2022 Mar 31;12:730530. doi: 10.3389/fonc.2022.730530. eCollection 2022.
9
Single-Cell Sequencing: Biological Insight and Potential Clinical Implications in Pediatric Leukemia.单细胞测序:儿童白血病中的生物学见解及潜在临床意义
Cancers (Basel). 2021 Nov 12;13(22):5658. doi: 10.3390/cancers13225658.
人类 T 细胞的单细胞转录组学揭示了健康和疾病中的组织和激活特征。
Nat Commun. 2019 Oct 17;10(1):4706. doi: 10.1038/s41467-019-12464-3.
4
CXCL13 and Its Receptor CXCR5 in Cancer: Inflammation, Immune Response, and Beyond.癌症中的CXCL13及其受体CXCR5:炎症、免疫反应及其他
Front Endocrinol (Lausanne). 2019 Jul 12;10:471. doi: 10.3389/fendo.2019.00471. eCollection 2019.
5
Identifying gene expression programs of cell-type identity and cellular activity with single-cell RNA-Seq.利用单细胞 RNA-Seq 鉴定细胞类型身份和细胞活性的基因表达程序。
Elife. 2019 Jul 8;8:e43803. doi: 10.7554/eLife.43803.
6
Efficient integration of heterogeneous single-cell transcriptomes using Scanorama.使用 Scanorama 实现高效的异质单细胞转录组整合。
Nat Biotechnol. 2019 Jun;37(6):685-691. doi: 10.1038/s41587-019-0113-3. Epub 2019 May 6.
7
Frequent germline mutations of in sporadic subcutaneous panniculitis-like T-cell lymphoma.在散发的皮下脂膜炎样 T 细胞淋巴瘤中,经常出现 的种系突变。
Blood Adv. 2019 Feb 26;3(4):588-595. doi: 10.1182/bloodadvances.2018028340.
8
The 2018 update of the WHO-EORTC classification for primary cutaneous lymphomas.2018 年版 WHO-EORTC 原发性皮肤淋巴瘤分类。
Blood. 2019 Apr 18;133(16):1703-1714. doi: 10.1182/blood-2018-11-881268. Epub 2019 Jan 11.
9
Human disease mutations highlight the inhibitory function of TIM-3.人类疾病突变凸显 TIM-3 的抑制功能。
Nat Genet. 2018 Dec;50(12):1640-1641. doi: 10.1038/s41588-018-0289-3.
10
Germline HAVCR2 mutations altering TIM-3 characterize subcutaneous panniculitis-like T cell lymphomas with hemophagocytic lymphohistiocytic syndrome.胚系 HAVCR2 突变改变 TIM-3 特征性表现为伴有噬血细胞性淋巴组织细胞增生症的皮下脂膜炎样 T 细胞淋巴瘤。
Nat Genet. 2018 Dec;50(12):1650-1657. doi: 10.1038/s41588-018-0251-4. Epub 2018 Oct 29.