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转录组和植物激素分析为十字花科甘蓝(Brassica oleracea)杂种致死性的分子调控网络提供了新的见解。

Transcriptome and plant hormone analyses provide new insight into the molecular regulatory networks underlying hybrid lethality in cabbage (Brassica oleracea).

机构信息

Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Ministry of Agriculture, 12# Zhongguancun Nandajie Street, Beijing, 100081, China.

出版信息

Planta. 2021 Apr 11;253(5):96. doi: 10.1007/s00425-021-03608-1.

Abstract

Comparative morphological, transcriptomic and phytohormone analyses reveal a defence network leading to PCD involved in cabbage hybrid lethality. Hybrid lethality (HL) plays an essential role in the stability of a population by blocking gene exchange between species, but the molecular mechanism remains largely undetermined. In this study, we performed phenotype, transcriptome and plant hormone analyses of HL in cabbage. Phenotype analysis confirmed that HL is characterised by a typical programmed cell death (PCD) process. A time-resolved RNA-Seq identified 2724 differentially expressed genes (DEGs), and functional annotations analyses revealed that HL was closely associated with the defence response. A defence regulation network was constructed based on the plant-pathogen interaction pathway and MAPK signalling pathway, which comprised DEGs related to Ca and hydrogen peroxide (HO) leading to PCD. Moreover, important DEGs involved in hormone signal transduction pathways including salicylic acid (SA) and jasmonic acid (JA) were identified, which were further confirmed by endogenous and exogenous SA and JA measurements. Our results identified key genes and pathways in the regulating network of HL in cabbage, and might open the gate for revealing the molecular mechanism of HL in plants.

摘要

比较形态学、转录组学和植物激素分析揭示了一个涉及细胞程序性死亡(PCD)的防御网络,导致白菜杂种不育。杂种不育(HL)通过阻止物种间的基因交换,在种群稳定性中起着至关重要的作用,但分子机制在很大程度上仍未确定。在本研究中,我们对白菜 HL 的表型、转录组和植物激素进行了分析。表型分析证实 HL 的特征是典型的程序性细胞死亡(PCD)过程。时间分辨 RNA-Seq 鉴定了 2724 个差异表达基因(DEGs),功能注释分析表明 HL 与防御反应密切相关。基于植物-病原体相互作用途径和 MAPK 信号通路构建了一个防御调控网络,该网络包含与钙和过氧化氢(HO)导致 PCD 相关的 DEGs。此外,还鉴定了参与激素信号转导途径的重要 DEGs,包括水杨酸(SA)和茉莉酸(JA),并通过内源和外源 SA 和 JA 的测量进一步证实了这一点。我们的研究结果确定了白菜 HL 调控网络中的关键基因和途径,这可能为揭示植物中 HL 的分子机制打开大门。

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