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AMD 遗传学:关联、进展和预测的方法与分析。

AMD Genetics: Methods and Analyses for Association, Progression, and Prediction.

机构信息

Department of Obstetrics and Gynecology, Columbia University Irving Medical Center, New York, NY, USA.

Department of Biostatistics, School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA.

出版信息

Adv Exp Med Biol. 2021;1256:191-200. doi: 10.1007/978-3-030-66014-7_7.

DOI:10.1007/978-3-030-66014-7_7
PMID:33848002
Abstract

Age-related macular degeneration (AMD) is a multifactorial neurodegenerative disease, which is a leading cause of vision loss among the elderly in the developed countries. As one of the most successful examples of genome-wide association study (GWAS), a large number of genetic studies have been conducted to explore the genetic basis for AMD and its progression, of which over 30 loci were identified and confirmed. In this chapter, we review the recent development and findings of GWAS for AMD risk and progression. Then, we present emerging methods and models for predicting AMD development or its progression using large-scale genetic data. Finally, we discuss a set of novel statistical and analytical methods that were recently developed to tackle the challenges such as analyzing bilateral correlated eye-level outcomes that are subject to censoring with high-dimensional genetic data. Future directions for analytical studies of AMD genetics are also proposed.

摘要

年龄相关性黄斑变性(AMD)是一种多因素神经退行性疾病,是发达国家老年人视力丧失的主要原因。作为全基因组关联研究(GWAS)最成功的范例之一,已经进行了大量的遗传研究来探索 AMD 及其进展的遗传基础,其中已确定并证实了 30 多个位点。在本章中,我们回顾了 AMD 风险和进展的 GWAS 的最新进展和发现。然后,我们提出了使用大规模遗传数据预测 AMD 发展或其进展的新兴方法和模型。最后,我们讨论了一组最近开发的新的统计和分析方法,用于解决分析具有高维遗传数据的双侧相关眼水平结局的问题,这些结局受到删失的影响。还提出了 AMD 遗传学分析的未来方向。

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Nat Mach Intell. 2020 Feb;2(2):141-150. doi: 10.1038/s42256-020-0154-9. Epub 2020 Feb 14.
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A systems biology approach towards understanding and treating non-neovascular age-related macular degeneration.一种系统生物学方法,用于理解和治疗非新生血管性年龄相关性黄斑变性。
Nat Commun. 2019 Jul 26;10(1):3347. doi: 10.1038/s41467-019-11262-1.
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Prediction of cardiovascular risk factors from retinal fundus photographs via deep learning.
眼部疾病中DNA甲基化修饰的新视角。
Int J Ophthalmol. 2025 Feb 18;18(2):340-350. doi: 10.18240/ijo.2025.02.19. eCollection 2025.
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The negative association between the docosapentaenoic acid intake and the incidence of AMD based on NHANES 2005-2008.基于2005 - 2008年美国国家健康与营养检查调查(NHANES),二十二碳五烯酸摄入量与年龄相关性黄斑变性发病率之间的负相关关系。
Front Nutr. 2024 Jul 25;11:1435775. doi: 10.3389/fnut.2024.1435775. eCollection 2024.
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Influence of Genetic Polymorphisms on the Short-Term Response to Ranibizumab in Patients With Neovascular Age-Related Macular Degeneration.遗传多态性对新生血管性年龄相关性黄斑变性患者短期接受雷珠单抗治疗反应的影响。
Invest Ophthalmol Vis Sci. 2023 Oct 3;64(13):34. doi: 10.1167/iovs.64.13.34.
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Endogenous and Exogenous Regulation of Redox Homeostasis in Retinal Pigment Epithelium Cells: An Updated Antioxidant Perspective.内源性和外源性调控视网膜色素上皮细胞氧化还原平衡:抗氧化视角的最新进展。
Int J Mol Sci. 2023 Jun 28;24(13):10776. doi: 10.3390/ijms241310776.
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A novel optical imaging probe for targeted visualization of NLRP3 inflammasomes in a mouse model of age-related macular degeneration.一种新型光学成像探针,用于在年龄相关性黄斑变性小鼠模型中对NLRP3炎性小体进行靶向可视化。
Front Med (Lausanne). 2023 Jan 10;9:1047791. doi: 10.3389/fmed.2022.1047791. eCollection 2022.
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