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来自……的基因特征分析:寻找最具毒性的基因

Characterization of Genes From : Searching for the Most Virulent Ones.

作者信息

Xiang Gaoqing, Yin Xiao, Niu Weili, Chen Tingting, Liu Ruiqi, Shang Boxing, Fu Qingqing, Liu Guotian, Ma Hui, Xu Yan

机构信息

State Key Laboratory of Crop Stress Biology in Arid Areas, College of Horticulture, Northwest A&F University, Yangling, China.

Key Laboratory of Horticultural Plant Biology and Germplasm Innovation in Northwest China, Ministry of Agriculture, College of Horticulture, Northwest A&F University, Yangling, China.

出版信息

Front Microbiol. 2021 Mar 22;12:632047. doi: 10.3389/fmicb.2021.632047. eCollection 2021.

Abstract

Grapevine downy mildew is an insurmountable disease that endangers grapevine production and the wine industry worldwide. The causal agent of the disease is the obligate biotrophic oomycete , for which the pathogenic mechanism remains largely unknown. Crinkling and necrosis proteins (CRN) are an ancient class of effectors utilized by pathogens, including oomycetes, that interfere with host plant defense reactions. In this study, 27 genes were cloned from the isolate YL genome, hereafter referred to as genes, and characterized and genes in 'YL' share high sequence identities with their ortholog genes in the other three previously sequenced isolates. Sequence divergence among the genes in the family indicates that different genes have different roles. Phylogenetic analysis of the PvCRN and the CRN proteins encoded by genes in the genome suggests that various functions might have been acquired by the superfamily through independent evolution of species. When transiently expressed in plant cells, the PvCRN protein family shows multiple subcellular localizations. None of the cloned PvCRN proteins induced hypersensitive response (HR)-like cell death on the downy mildew-resistant grapevine . This was in accordance with the result that most PvCRN proteins, except PvCRN11, failed to induce necrosis in . Pattern-triggered immunity (PTI) induced by INF1 was hampered by several PvCRN proteins. In addition, 15 PvCRN proteins prevented Bax-induced plant programmed cell death. Among the cell death-suppressing members, PvCRN17, PvCRN20, and PvCRN23 were found to promote the susceptibility of to , which is a semi-biotrophic oomycete. Moreover, the nucleus-targeting member, PvCRN19, promoted the susceptibility of to . Therefore, these PvCRN proteins were estimated to be virulent effectors involved in the pathogenicity of YL. Collectively, this study provides comprehensive insight into the CRN effector repertoire of YL, which will help further elucidate the molecular mechanisms of the pathogenesis of grapevine downy mildew.

摘要

葡萄霜霉病是一种危害全球葡萄生产和葡萄酒产业的难以攻克的病害。该病害的致病因子是专性活体营养卵菌,其致病机制在很大程度上仍不清楚。卷曲和坏死蛋白(CRN)是包括卵菌在内的病原体所利用的一类古老的效应子,它们会干扰宿主植物的防御反应。在本研究中,从分离株YL基因组中克隆了27个基因,以下简称PvCRN基因,并对其进行了表征,“YL”中的PvCRN基因与其在其他三个先前测序的葡萄霜霉菌分离株中的直系同源基因具有高度的序列同一性。PvCRN基因家族中的序列差异表明不同的PvCRN基因具有不同的作用。对PvCRN和葡萄霜霉菌基因组中基因编码的CRN蛋白进行系统发育分析表明,PvCRN超家族可能通过葡萄霜霉菌物种的独立进化获得了多种功能。当在植物细胞中瞬时表达时,PvCRN蛋白家族表现出多种亚细胞定位。在抗霜霉病的葡萄品种上,克隆的PvCRN蛋白均未诱导类似过敏反应(HR)的细胞死亡。这与大多数PvCRN蛋白(除PvCRN11外)在本氏烟中未能诱导坏死的结果一致。几种PvCRN蛋白阻碍了INF1诱导的模式触发免疫(PTI)。此外,15种PvCRN蛋白阻止了Bax诱导的植物程序性细胞死亡。在抑制细胞死亡的成员中,发现PvCRN17、PvCRN20和PvCRN23促进了葡萄对拟盘多毛孢菌的感病性,拟盘多毛孢菌是一种半活体营养卵菌。此外,靶向细胞核的成员PvCRN19促进了葡萄对葡萄霜霉菌的感病性。因此,估计这些PvCRN蛋白是参与葡萄霜霉菌株YL致病性的毒性效应子。总的来说,本研究提供了对葡萄霜霉菌株YL的CRN效应子库的全面见解,这将有助于进一步阐明葡萄霜霉病发病机制的分子机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f5a7/8044898/7182cee0d905/fmicb-12-632047-g001.jpg

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