Lawrence J. Ellison Institute for Transformative Medicine, University of Southern California, Los Angeles, CA 90064, USA.
Wake Forest Institute for Regenerative Medicine, Winston-Salem, NC 27157, USA.
Gigascience. 2021 Apr 19;10(4). doi: 10.1093/gigascience/giab026.
Colorectal cancer (CRC) mortality is principally due to metastatic disease, with the most frequent organ of metastasis being the liver. Biochemical and mechanical factors residing in the tumor microenvironment are considered to play a pivotal role in metastatic growth and response to therapy. However, it is difficult to study the tumor microenvironment systematically owing to a lack of fully controlled model systems that can be investigated in rigorous detail.
We present a quantitative imaging dataset of CRC cell growth dynamics influenced by in vivo-mimicking conditions. They consist of tumor cells grown in various biochemical and biomechanical microenvironmental contexts. These contexts include varying oxygen and drug concentrations, and growth on conventional stiff plastic, softer matrices, and bioengineered acellular liver extracellular matrix. Growth rate analyses under these conditions were performed via the cell phenotype digitizer (CellPD).
Our data indicate that the growth of highly aggressive HCT116 cells is affected by oxygen, substrate stiffness, and liver extracellular matrix. In addition, hypoxia has a protective effect against oxaliplatin-induced cytotoxicity on plastic and liver extracellular matrix. This expansive dataset of CRC cell growth measurements under in situ relevant environmental perturbations provides insights into critical tumor microenvironment features contributing to metastatic seeding and tumor growth. Such insights are essential to dynamical modeling and understanding the multicellular tumor-stroma dynamics that contribute to metastatic colonization. It also establishes a benchmark dataset for training and testing data-driven dynamical models of cancer cell lines and therapeutic response in a variety of microenvironmental conditions.
结直肠癌(CRC)的死亡率主要归因于转移性疾病,最常见的转移器官是肝脏。肿瘤微环境中的生化和力学因素被认为在转移性生长和对治疗的反应中起着关键作用。然而,由于缺乏可以进行严格详细研究的完全受控模型系统,因此很难系统地研究肿瘤微环境。
我们提出了一个定量成像数据集,用于研究受体内模拟条件影响的 CRC 细胞生长动态。这些数据集中的肿瘤细胞生长在各种生化和生物力学微环境条件下。这些条件包括不同的氧和药物浓度,以及在常规硬塑料、较软基质和生物工程无细胞肝细胞外基质上的生长。通过细胞表型数字化仪(CellPD)对这些条件下的生长速率进行了分析。
我们的数据表明,高度侵袭性的 HCT116 细胞的生长受到氧、基质硬度和肝细胞外基质的影响。此外,缺氧对塑料和肝细胞外基质上奥沙利铂诱导的细胞毒性具有保护作用。该 CRC 细胞在原位相关环境扰动下生长测量的扩展数据集提供了对有助于转移播种和肿瘤生长的关键肿瘤微环境特征的深入了解。这些见解对于动态建模和理解有助于转移定植的肿瘤细胞-基质动力学至关重要。它还为在各种微环境条件下训练和测试癌症细胞系的数据驱动动力学模型以及治疗反应建立了基准数据集。